Evidence of a potential receptor-binding site on the Nipah virus G protein (NiV-G): identification of globular head residues with a role in fusion promotion and their localization on an NiV-G structural model.

Vanessa Guillaume1 Hamide Aslan Michelle Ainouze Mathilde Guerbois T Fabian Wild Robin Buckland Johannes P M Langedijk
Affiliations 1 institutions
  1. Molecular Basis of Paramyxovirus Entry, INSERM U404, Centre d'Etudes de Recherche en Virologie et Immunologie, IFR 128 Biosciences Lyon-Gerland, 21 avenue Tony Garnier, 69365 Lyon cedex 07, France.

Abstract

As a preliminary to the localization of the receptor-binding site(s) on the Nipah virus (NiV) glycoprotein (NiV-G), we have undertaken the identification of NiV-G residues that play a role in fusion promotion. To achieve this, we have used two strategies. First, as NiV and Hendra virus (HeV) share a common receptor and their cellular tropism is similar, we hypothesized that residues functioning in receptor attachment could be conserved between their respective G proteins. Our initial strategy was to target charged residues (which can be expected to be at the surface of the protein) conserved between the NiV-G and HeV-G globular heads. Second, we generated NiV variants that escaped neutralization by anti-NiV-G monoclonal antibodies (MAbs) that neutralize NiV both in vitro and in vivo, likely by blocking receptor attachment. The sequencing of such "escape mutants" identified NiV-G residues present in the epitopes to which the neutralizing MAbs are directed. Residues identified via these two strategies whose mutation had an effect on fusion promotion were localized on a new structural model for the NiV-G protein. Our results suggest that seven NiV-G residues, including one (E533) that was identified using both strategies, form a contiguous site on the top of the globular head that is implicated in ephrinB2 binding. This site commences near the shallow depression in the center of the top surface of the globular head and extends to the rim of the barrel-like structure on the top loops of beta-sheet 5. The topology of this site is strikingly similar to that proposed to form the SLAM receptor site on another paramyxovirus attachment protein, that of the measles virus hemagglutinin.

Supporting text Virus Host Location
Models, Molecular 99 Amino Acid Sequence 128 Animals 1948 Antibodies, Monoclonal 26 Binding Sites 89 Chlorocebus aethiops 70 CHO Cells 4 Cricetinae 41 Cricetulus 7 Ephrin-B2 14 Humans 1440 Membrane Fusion 11 Molecular Sequence Data 160 Mutation 209 Nipah Virus 45 Receptors, Cell Surface 28 Sequence Homology, Amino Acid 18 Vero Cells 55 Viral Envelope Proteins 60 attachment protein G 8

Evidence records

1 total
Functional Mechanism
1 records · 1 evidence types
Evidence type
1 records
OVE337
Key finding

Seven residues on the Nipah virus G protein globular head form a contiguous site implicated in binding to the ephrinB2 receptor.

Virus
Host
Not specified
Location
Not specified
Supporting text

Our results suggest that seven NiV-G residues, including one (E533) that was identified using both strategies, form a contiguous site on the top of the globular head that is implicated in ephrinB2 binding.

Method
mutagenesis | neutralizing monoclonal antibody escape mutants | structural modeling
Receptors
ephrinB2