The influence of bat ecology on viral diversity and reservoir status.

Cylita Guy1,2 John M Ratcliffe1,2 Nicole Mideo1
Affiliations 2 institutions
  1. Department of Ecology and Evolutionary Biology University of Toronto Toronto ON Canada.
  2. Department of Biology University of Toronto at Mississauga Mississauga ON Canada.

Abstract

Repeated emergence of zoonotic viruses from bat reservoirs into human populations demands predictive approaches to preemptively identify virus-carrying bat species. Here, we use machine learning to examine drivers of viral diversity in bats, determine whether those drivers depend on viral genome type, and predict undetected viral carriers. Our results indicate that bat species with longer life spans, broad geographic distributions in the eastern hemisphere, and large group sizes carry more viruses overall. Life span was a stronger predictor of deoxyribonucleic acid viral diversity, while group size and family were more important for predicting ribonucleic acid viruses, potentially reflecting broad differences in infection duration. Importantly, our models predict 54 bat species as likely carriers of zoonotic viruses, despite not currently being considered reservoirs. Mapping these predictions as a proportion of local bat diversity, we identify global regions where efforts to reduce disease spillover into humans by identifying viral carriers may be most productive.

Chiroptera 376 infectious disease forecasting 0 machine learning 11 pathogen diversity 0 viruses 117 zoonotic disease 19

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