Dual host-virus arms races shape an essential housekeeping protein.

Ann Demogines1 Jonathan Abraham Hyeryun Choe Michael Farzan Sara L Sawyer
Affiliations 1 institutions
  1. Department of Molecular Genetics and Microbiology, Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, Texas, USA.

Abstract

Transferrin Receptor (TfR1) is the cell-surface receptor that regulates iron uptake into cells, a process that is fundamental to life. However, TfR1 also facilitates the cellular entry of multiple mammalian viruses. We use evolutionary and functional analyses of TfR1 in the rodent clade, where two families of viruses bind this receptor, to mechanistically dissect how essential housekeeping genes like TFR1 successfully balance the opposing selective pressures exerted by host and virus. We find that while the sequence of rodent TfR1 is generally conserved, a small set of TfR1 residue positions has evolved rapidly over the speciation of rodents. Remarkably, all of these residues correspond to the two virus binding surfaces of TfR1. We show that naturally occurring mutations at these positions block virus entry while simultaneously preserving iron-uptake functionalities, both in rodent and human TfR1. Thus, by constantly replacing the amino acids encoded at just a few residue positions, TFR1 divorces adaptation to ever-changing viruses from preservation of key cellular functions. These dynamics have driven genetic divergence at the TFR1 locus that now enforces species-specific barriers to virus transmission, limiting both the cross-species and zoonotic transmission of these viruses.

Supporting text Virus Host Location
Genes, Essential 1 Amino Acid Sequence 128 Animals 1948 Arenaviruses, New World 7 Cell Line 158 Dogs 176 Humans 1440 Iron 1 Mice 253 Molecular Sequence Data 160 Mutation 209 Polymorphism, Single Nucleotide 6 Receptors, Transferrin 3 Receptors, Virus 204 Viral Proteins 152 Virus Internalization 100 Zoonoses 397

Evidence records

2 total
Functional Mechanism
2 records · 1 evidence types
Evidence type
2 records
OVE1447
Key finding

Genetic divergence of the TfR1 receptor between rodents and humans creates species-specific barriers that limit zoonotic transmission of two families of viruses from rodents to humans.

Virus
Host
Location
Not specified
Supporting text

These dynamics have driven genetic divergence at the TFR1 locus that now enforces species-specific barriers to virus transmission, limiting both the cross-species and zoonotic transmission of these viruses.

Method
genomic analysis | functional receptor assays
Receptors
TFR1 | Transferrin Receptor
OVE1446
Key finding

Genetic divergence of rodent TfR1 enforces species-specific barriers that limit viral transmission between different rodent species.

Virus
Host
Location
Not specified
Supporting text

These dynamics have driven genetic divergence at the TFR1 locus that now enforces species-specific barriers to virus transmission, limiting both the cross-species and zoonotic transmission of these viruses.

Method
evolutionary analysis | functional assay of TfR1 receptor
Receptors
TFR1 | Transferrin Receptor