|
PMID 15313461
|
Transferrin receptor 1. Int J Biochem Cell Biol 36: 2137–2143 |
Aisen P (2004) Transferrin receptor 1 |
2004 |
|
PMID 10638746
|
Crystal structure of the hereditary haemochromatosis protein HFE complexed with transferrin receptor |
Bennett |
2000 |
|
PMID 21788477
|
How the binding of human transferrin primes the transferrin receptor potentiating iron release at endosomal pH |
Eckenroth |
2011 |
|
PMID 14980223
|
Structure of the human transferrin receptor-transferrin complex |
Cheng |
2004 |
|
PMID 20208545
|
Structural basis for receptor recognition by New World hemorrhagic fever arenaviruses |
Abraham |
2010 |
|
PMID 17287727
|
(2007) Transferrin receptor 1 is a cellular receptor for New World haemorrhagic fever arenaviruses |
Radoshitzky |
2007 |
|
PMID 18268337
|
(2008) Receptor determinants of zoonotic transmission of New World hemorrhagic fever arenaviruses |
Radoshitzky |
2008 |
|
PMID 19343214
|
(2009) Host-species Transferrin Receptor 1 orthologs are cellular receptors for nonpathogenic New World clade B arenaviruses |
Abraham |
2009 |
|
PMID 18003730
|
(2008) New world clade B arenaviruses can use transferrin receptor 1 (TfR1)-dependent and -independent entry pathways, and glycoproteins from human pathogenic strains are associated with the use of TfR1 |
Flanagan |
2008 |
|
PMID 21807555
|
Transferrin receptor 1 in the zoonosis and pathogenesis of New World hemorrhagic fever arenaviruses. Curr Opin Microbiol 14: 476–482 |
Choe |
2011 |
|
PMID 12615305
|
Arenaviruses other than Lassa virus. Antiviral Res 57: 89–100 |
Charrel |
2003 |
|
PMID 12218182
|
Mouse transferrin receptor 1 is the cell entry receptor for mouse mammary tumor virus |
Ross |
2002 |
|
PMID 16481319
|
Identification of the segments of the mouse transferrin receptor 1 required for mouse mammary tumor virus infection |
Wang |
2006 |
|
PMID 18829060
|
(2008) Mouse mammary tumor virus uses mouse but not human transferrin receptor 1 to reach a low pH compartment and infect cells. Virology 381: 230–240 |
Wang |
2008 |
|
PMID 16160187
|
Conversion of mouse mammary tumor virus to a lymphomagenic virus |
Bhadra |
2005 |
|
PMID 11264378
|
Canine and feline parvoviruses can use human or feline transferrin receptors to bind, enter, and infect cells |
Parker |
2001 |
|
PMID 22072763
|
(2011) Role of multiple hosts in the cross-species transmission and emergence of a pandemic parvovirus |
Allison |
2011 |
|
PMID 16153179
|
The origins of new pandemic viruses: the acquisition of new host ranges by canine parvovirus and influenza A viruses |
Parrish |
2005 |
|
PMID 22114336
|
(2012) The role of evolutionary intermediates in the host adaptation of canine parvovirus |
Stucker |
2012 |
|
PMID 21855347
|
Virus-host interactomes and global models of virus-infected cells. Trends Microbiol 19: 501–508 |
Friedel |
2011 |
|
PMID 20865163
|
(2010) A novel CCR5 mutation common in sooty mangabeys reveals SIVsmm infection of CCR5-null natural hosts and efficient alternative coreceptor use in vivo |
Riddick |
2010 |
|
PMID 15715976
|
The evolutionary history of the CCR5-Delta32 HIV-resistance mutation. Microbes Infect 7: 302–309 |
Galvani |
2005 |
|
PMID 9841919
|
(1998) Natural infection of a homozygous delta24 CCR5 red-capped mangabey with an R2b-tropic simian immunodeficiency virus |
Chen |
1998 |
|
PMID 10570183
|
(1999) Emergence of FY*A(null) in a Plasmodium vivax-endemic region of Papua New Guinea |
Zimmerman |
1999 |
|
PMID 7663520
|
Disruption of a GATA motif in the Duffy gene promoter abolishes erythroid gene expression in Duffy-negative individuals |
Tournamille |
1995 |
|
PMID 19553936
|
(2009) Evolution of a malaria resistance gene in wild primates |
Tung |
2009 |
|
PMID 22357652
|
(2012) CD46 measles virus receptor polymorphisms influence receptor protein expression and primary measles vaccine responses in naive Australian children. Clinical and Vaccine Immunology 19: 704–710 |
Clifford |
2012 |
|
PMID 18694346
|
Effects of retroviruses on host genome function |
Jern |
2008 |
|
PMID 22565131
|
Studies of endogenous retroviruses reveal a continuing evolutionary saga |
Stoye JP (2012) Studies of endogenous re |
2012 |
|
PMID 6322171
|
A unique sequence related to the ecotropic murine leukemia virus is associated with the Fv-4 resistance gene |
Kozak |
1984 |
|
PMID 2555565
|
Fv-4 resistance gene: a truncated endogenous murine leukemia virus with ecotropic interference properties |
Ikeda |
1989 |
|
PMID 8510219
|
Transgenic Fv-4 mice resistant to Friend virus |
Limjoco |
1993 |
|
PMID 12477881
|
Receptor usage and fetal expression of ovine endogenous betaretroviruses: implications for coevolution of endogenous and exogenous retroviruses |
Spencer |
2003 |
|
PMID 6275116
|
Host susceptibility to endogenous viruses: defective, glycoprotein-expressing proviruses interfere with infections |
Robinson |
1981 |
|
PMID 8138999
|
(1994) Defective endogenous proviruses are expressed in feline lymphoid cells: evidence for a role in natural resistance to subgroup B feline leukemia viruses |
McDougall |
1994 |
|
PMID 22901901
|
Paleovirology and virally derived immunity. Trends Ecol Evol (Amst) 27: 627–636 |
Aswad |
2012 |
|
PMID 20061127
|
Recognition of viruses by cytoplasmic sensors. Curr Opin Immunol 22: 41–47 |
Wilkins |
2010 |
|
PMID 22553496
|
HIV restriction factors and mechanisms of evasion. Cold Spring Harb Perspect Med 2: a006940 |
Malim |
2012 |
|
PMID 18989317
|
Viral evasion and subversion of pattern-recognition receptor signalling |
Bowie |
2008 |
|
PMID 18541215
|
HIV-1 accessory proteins—ensuring viral survival in a hostile environment |
Malim |
2008 |
|
PMID 15689398
|
Positive selection of primate TRIM5alpha identifies a critical species-specific retroviral restriction domain |
Sawyer |
2005 |
|
PMID 22284954
|
(2012) The ability of primate lentiviruses to degrade the monocyte restriction factor SAMHD1 preceded the birth of the viral accessory protein Vpx |
Lim |
2012 |
|
PMID 22264516
|
The host restriction factor APOBEC3G and retroviral vif protein coevolve due to ongoing genetic conflict |
Compton |
2012 |
|
PMID 20444900
|
Ancient adaptive evolution of tetherin shaped the functions of Vpu and Nef in human immunodeficiency virus and primate lentiviruses |
Lim |
2010 |
|
PMID 19214216
|
(2009) Species-specific activity of HIV-1 Vpu and positive selection of tetherin transmembrane domain variants |
McNatt |
2009 |
|
PMID 22305291
|
(2012) Evolutionary and functional analyses of the interaction between the myeloid restriction factor SAMHD1 and the lentiviral Vpx protein |
Laguette |
2012 |
|
PMID 19461879
|
(2009) Mutation of a single residue renders human tetherin resistant to HIV-1 Vpu-mediated depletion |
Gupta |
2009 |
|
PMID 19043403
|
Protein kinase R reveals an evolutionary model for defeating viral mimicry |
Elde |
2009 |
|
PMID 22427742
|
Convergent evolution of escape from hepaciviral antagonism in primates |
Patel |
2012 |
|
PMID 19043413
|
Rapid evolution of protein kinase PKR alters sensitivity to viral inhibitors |
Rothenburg |
2008 |
|
PMID 21531564
|
Two-stepping through time: mammals and viruses. Trends Microbiol 19: 286–294 |
Meyerson |
2011 |
|
PMID 23145935
|
Rules of engagement: molecular insights from host-virus arms races |
Daugherty |
2012 |
|
PMID 22976433
|
Evolutionary conflicts between viruses and restriction factors shape immunity |
Duggal |
2012 |
|
PMID 14971025
|
Mini-review: defense strategies and immunity-related genes. Eur J Immunol 34: 7–17 |
Trowsdale |
2004 |
|
-
|
Point, counterpoint: the evolution of pathogenic viruses and their human hosts |
Worobey |
2007 |
|
PMID 19238338
|
Molecular evolution of the antiretroviral TRIM5 gene. Immunogenetics 61: 163–176 |
Johnson |
2009 |
|
PMID 22144910
|
Identification of a genomic reservoir for new TRIM genes in primate genomes |
Han |
2011 |
|
PMID 15269786
|
Ancient adaptive evolution of the primate antiviral DNA-editing enzyme APOBEC3G |
Sawyer |
2004 |
|
PMID 22835485
|
A cross-species view on viruses. Current Opinion in Virology 2: 561–568 |
Sawyer |
2012 |
|
PMID 20808775
|
(2010) TRIM5 suppresses cross-species transmission of a primate immunodeficiency virus and selects for emergence of resistant variants in the new species |
Kirmaier |
2010 |
|
PMID 22980333
|
(2012) Reacquisition of nef-mediated tetherin antagonism in a single in vivo passage of HIV-1 through its original chimpanzee host |
Götz |
2012 |
|
PMID 15367941
|
Adaptation and immunity |
Holmes EC (2004) Adaptation and immunity |
2004 |
|
PMID 11114436
|
Statistical methods for detecting molecular adaptation. Trends Ecol Evol 15: 496–503 |
Yang |
2000 |
|
PMID 9367129
|
PAML: a program package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci 13: 555–556 |
Yang Z (1997) PAML: a program package fo |
1997 |
|
PMID 10531064
|
(1999) Crystal structure of the ectodomain of human transferrin receptor |
Lawrence |
1999 |
|
PMID 19494008
|
(2009) Unusual molecular architecture of the machupo virus attachment glycoprotein |
Bowden |
2009 |
|
PMID 15140976
|
Multiple groups of endogenous betaretroviruses in mice, rats, and other mammals |
Baillie |
2004 |
|
PMID 21909269
|
(2011) The fecal viral flora of wild rodents |
Phan |
2011 |
|
PMID 12970432
|
Identification of the receptor binding domain of the mouse mammary tumor virus envelope protein |
Zhang |
2003 |
|
PMID 14691533
|
Mechanism for multiple ligand recognition by the human transferrin receptor |
Giannetti |
2003 |
|
PMID 11988060
|
(2002) Hemorrhagic fever viruses as biological weapons: medical and public health management. JAMA 287: 2391–2405 |
Borio |
2002 |
|
PMID 22570610
|
(2012) Evolutionary reconstructions of the transferrin receptor of Caniforms supports canine parvovirus being a re-emerged and not a novel pathogen in dogs |
Kaelber |
2012 |
|
PMID 15167933
|
Human genes that limit AIDS |
O'Brien |
2004 |
|
PMID 21118532
|
The mouse “xenotropic” gammaretroviruses and their XPR1 receptor. Retrovirology 7: 101 |
Kozak CA (2010) The mouse “xenotropic” g |
2010 |
|
PMID 12767991
|
Mechanisms of avian retroviral host range extension |
Rainey |
2003 |
|
PMID 22438550
|
Evidence for ACE2-utilizing coronaviruses (CoVs) related to severe acute respiratory syndrome CoV in bats |
Demogines |
2012 |
|
PMID 18772285
|
(2008) Cross-species virus transmission and the emergence of new epidemic diseases. Microbiol Mol Biol Rev 72: 457–470 |
Parrish |
2008 |
|
PMID 19342221
|
Specificity switching in virus-receptor complexes. Curr Opin Struct Biol 19: 181–188 |
Stehle |
2009 |
|
PMID 11352064
|
Evolution of cell recognition by viruses |
Baranowski |
2001 |
|
PMID 21878684
|
Species-specific features of DARC, the primate receptor for Plasmodium vivax and Plasmodium knowlesi. Mol Biol Evol 29: 445–449 |
Demogines |
2012 |
|
PMID 20975951
|
(2010) Ancient and recent adaptive evolution of primate non-homologous end joining genes |
Demogines |
2010 |
|
PMID 17101967
|
Positive selection of yeast nonhomologous end-joining genes and a retrotransposon conflict hypothesis |
Sawyer |
2006 |
|
PMID 9396791
|
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools |
Thompson |
1997 |
|
PMID 22847109
|
jModelTest 2: more models, new heuristics and parallel computing |
Darriba |
2012 |
|
PMID 21546353
|
(2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 2731–2739 |
Tamura |
2011 |
|
PMID 16213166
|
On the Sigmodontinae radiation (Rodentia, Cricetidae): an appraisal of the phylogenetic position of Rhagomys. Mol Phylogenet Evol 38: 558–564 |
D'Elía |
2006 |
|
PMID 17110367
|
GARD: a genetic algorithm for recombination detection |
Pond |
2006 |
|
PMID 7968486
|
A codon-based model of nucleotide substitution for protein-coding DNA sequences. Mol Biol Evol 11: 725–736 |
Goldman |
1994 |
|
PMID 11932250
|
BLAT—The BLAST-like alignment tool. Genome Res 12: 656–664 |
Kent WJ (2002) BLAT—The BLAST-like align |
2002 |
|
PMID 12466850
|
(2002) Initial sequencing and comparative analysis of the mouse genome |
Mouse Genome Sequencing Consortium (2002 |
2002 |
|
PMID 15057822
|
(2004) Genome sequence of the Brown Norway rat yields insights into mammalian evolution |
Gibbs |
2004 |
|
PMID 20959295
|
(2011) The UCSC Genome Browser database: update 2011 |
Fujita |
2011 |
|
PMID 15858031
|
Evolution and distribution of class II-related endogenous retroviruses |
Gifford |
2005 |
|
PMID 15034147
|
MUSCLE: multiple sequence alignment with high accuracy and high throughput |
Edgar RC (2004) MUSCLE: multiple sequenc |
2004 |
|
PMID 15140964
|
Capsid is a dominant determinant of retrovirus infectivity in nondividing cells |
Yamashita |
2004 |