Literature detail

Structural determinants for naturally evolving H5N1 hemagglutinin to switch its receptor specificity.

Kannan Tharakaraman1 Rahul Raman Karthik Viswanathan Nathan W Stebbins Akila Jayaraman Arvind Krishnan V Sasisekharan Ram Sasisekharan
Affiliations 1 institutions
  1. Department of Biological Engineering, Koch Institute of Integrative Cancer Research, Infectious Diseases Interdisciplinary Research Group, Singapore-MIT Alliance for Research and Technology, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA.
PMID 23746829 2013 Cell eng ppublish
PubMed DOI Browse context

Article

Publication summary

Of the factors governing human-to-human transmission of the highly pathogenic avian-adapted H5N1 virus, the most critical is the acquisition of mutations on the viral hemagglutinin (HA) to "quantitatively switch" its binding from avian to human glycan receptors. Here, we describe a structural framework that outlines a necessary set of H5 HA receptor-binding site (RBS) features required for the H5 HA to quantitatively switch its preference to human receptors. We show here that the same RBS HA mutations that lead to aerosol transmission of A/Vietnam/1203/04 and A/Indonesia/5/05 viruses, when introduced in currently circulating H5N1, do not lead to a quantitative switch in receptor preference. We demonstrate that HAs from circulating clades require as few as a single base pair mutation to quantitatively switch their binding to human receptors. The mutations identified by this study can be used to monitor the emergence of strains having human-to-human transmission potential.

Amino Acid Sequence Animals Birds Evolution, Molecular Hemagglutinin Glycoproteins, Influenza Virus Host Specificity Humans Influenza A Virus, H5N1 Subtype Influenza in Birds Influenza, Human Models, Molecular Molecular Sequence Data Mutation N-Acetylneuraminic Acid Phylogeny Receptors, Virus Sequence Alignment hemagglutinin, avian influenza A virus

Structured evidence records

Evidence records

3 total
1 records
Extraction confidence 0.80
Key finding

Structural and sequence analysis of H5N1 hemagglutinin revealed specific receptor-binding site mutations controlling the switch in receptor specificity from avian to human type.

Virus
Location
Not specified
Supporting text

We describe a structural framework outlining H5 hemagglutinin receptor-binding site features and show that the same RBS HA mutations that lead to aerosol transmission of A/Vietnam/1203/04 and A/Indonesia/5/05 viruses, when introduced in currently circulating H5N1, do not lead to a quantitative switch in receptor preference.

Genes or proteins
hemagglutinin; receptor-binding site
Analysis methods
molecular sequence analysis; structural modeling; phylogenetic analysis
1 records
Extraction confidence 0.98
Key finding

Mutations in the H5N1 hemagglutinin receptor-binding site mediate a switch from avian to human receptor specificity, enabling potential human-to-human transmission.

Virus
Host
Not specified
Location
Not specified
Supporting text

The acquisition of mutations on the viral hemagglutinin (HA) allows the H5N1 virus to switch its binding from avian to human glycan receptors. The same receptor-binding site mutations lead to aerosol transmission in A/Vietnam/1203/04 and A/Indonesia/5/05 viruses, and circulating H5N1 HAs can gain human receptor preference with as few as a single base pair mutation.

Genes or proteins
hemagglutinin; HA
Receptors
avian glycan receptor; human glycan receptor
Mechanism types
receptor_binding; host_range_adaptation
1 records
Extraction confidence 0.95
Key finding

Mutations in the H5N1 hemagglutinin receptor-binding site can switch binding specificity from avian to human glycan receptors.

Virus
Location
Not specified
Supporting text

The study describes a structural framework outlining features in the H5 hemagglutinin receptor-binding site required to switch its binding from avian to human glycan receptors, demonstrating that specific HA mutations can quantitatively change receptor preference.

Method
structural framework analysis; mutation analysis
Receptors
glycan receptors