Literature detail

Discovery and Evolutionary Analysis of a Novel Bat-Borne Paramyxovirus.

Wentao Zhu1 Yuyuan Huang1 Xiaojie Yu2 Haiyun Chen2 Dandan Li2 Libo Zhou2 Qianni Huang1 Liyun Liu1 Jing Yang1,3,4 Shan Lu1,3,4
Affiliations 4 institutions
  1. State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China.
  2. Hainan Provincial Center for Disease Control and Prevention, Haikou 570203, China.
  3. Shanghai Public Health Clinical Center, Fudan University, Shanghai 201508, China.
  4. Research Units of Discovery of Unknown Bacteria and Function, Chinese Academy of Medical Sciences, Beijing 100730, China.
PMID 35215881 2022 Viruses eng epublish
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Article

Publication summary

Paramyxoviruses are a group of RNA viruses, such as mumps virus, measles virus, Nipah virus, Hendra virus, Newcastle disease virus, and parainfluenza virus, usually transmitted by airborne droplets that are predominantly responsible for acute respiratory diseases. In this paper, we identified a novel paramyxovirus belonging to genus <i>Jeilongvirus</i> infecting 4/112 (3.6%) bats from two trapping sites of Hainan Province of China. In these animals, the viral RNA was detected exclusively in kidney tissues. This is the first full-length <i>Jeilongvirus</i> genome (18,095 nucleotides) from bats of genus <i>Hipposideros</i>, which exhibits a canonical genome organization and encodes SH and TM proteins. Results, based on phylogenic analysis and genetic distances, indicate that the novel paramyxovirus formed an independent lineage belonging to genus <i>Jeilongvirus</i>, representing, thus, a novel species. In addition, the virus-host macro-evolutionary analysis revealed that host-switching was not only a common co-phylogenetic event, but also a potential mechanism by which rats are infected by bat-origin <i>Jeilongvirus</i> through cross-species virus transmission, indicating a bat origin of the genus <i>Jeilongvirus</i>. Overall, our study broadens the viral diversity, geographical distribution, host range, and evolution of genus <i>Jeilongvirus</i>.

bat co-evolutionary Jeilongvirus paramyxovirus virus discovery Biological Coevolution Animals China Chiroptera Genome, Viral Host Specificity Kidney Paramyxoviridae Phylogeny RNA, Viral Species Specificity Viral Proteins

Structured evidence records

Evidence records

4 total
2 records
Extraction confidence 0.95
Key finding

The full-length genome and phylogenetic analysis show that the novel bat Jeilongvirus forms an independent lineage within the genus Jeilongvirus.

Virus
Location
Not specified
Supporting text

This is the first full-length Jeilongvirus genome (18,095 nucleotides) from bats of genus Hipposideros, which exhibits a canonical genome organization and encodes SH and TM proteins. Results, based on phylogenic analysis and genetic distances, indicate that the novel paramyxovirus formed an independent lineage belonging to genus Jeilongvirus, representing, thus, a novel species.

Genes or proteins
SH; TM; whole genome
Analysis methods
phylogenetic analysis; genetic distance analysis
Extraction confidence 0.90
Key finding

Macro-evolutionary co-phylogenetic analysis indicates host-switching events, with bat Jeilongvirus infecting rats and suggesting a bat origin of the genus.

Virus
Host
Location
Not specified
Supporting text

The virus-host macro-evolutionary analysis revealed that host-switching was not only a common co-phylogenetic event, but also a potential mechanism by which rats are infected by bat-origin Jeilongvirus through cross-species virus transmission, indicating a bat origin of the genus Jeilongvirus.

Analysis methods
macro-evolutionary analysis; co-phylogenetic analysis
1 records
Extraction confidence 0.85
Key finding

Phylogenetic analysis indicated cross-species transmission of bat-origin Jeilongvirus to rats.

Virus
Location
Supporting text

The virus-host macro-evolutionary analysis revealed that host-switching was not only a common co-phylogenetic event, but also a potential mechanism by which rats are infected by bat-origin Jeilongvirus through cross-species virus transmission.

Method
phylogenetic analysis; virus-host macro-evolutionary analysis
Study design
phylogenetic analysis
Transmission direction
animal-to-animal
Geographic raw
Hainan Province of China
Country inferred
China
1 records
Extraction confidence 0.95
Key finding

A novel Jeilongvirus was detected by viral RNA screening in Hipposideros bats captured in Hainan Province, China.

Virus
Host
Location
Supporting text

We identified a novel paramyxovirus belonging to genus Jeilongvirus infecting 4/112 (3.6%) bats from two trapping sites of Hainan Province of China. In these animals, the viral RNA was detected exclusively in kidney tissues.

Method
viral RNA detection
Sample type
kidney tissues
Geographic raw
Hainan Province of China
Country inferred
China