Global epidemiology of animal influenza infections with explicit virus subtypes until 2016: A spatio-temporal descriptive analysis.

Jiaqi Huang1,2 Ke Li1,2 Shuang Xiao1,2 Jian Hu1,2 Yun Yin1,2 Jun Zhang1,2 Shuhua Li3 Wenge Wang1,2 Jie Hong1,2 Zheng Zhao1,2 Xi Chen1,2 Yuanhua Liu1,2 Jin Shi1,2 Fen Hu1,2 Xianhui Ran1,2 Yue Ge1,2 Hao Jiang1,2 Zichong Liu1,2 Michael P Ward4 Zhijie Zhang1,2
Affiliations 4 institutions
  1. Department of Epidemiology and Health statistics, School of Public Health, Fudan University, Shanghai, China.
  2. Key Laboratory of Public Health Safety, Ministry of Education, Shanghai, China.
  3. Jinshan District Center for Disease Control and Prevention, Shanghai, China.
  4. University of Sydney School of Veterinary Science, Camden, NSW, Australia.

Abstract

Influenza virus, with a global distribution, diverse animal host range and multiple virus subtypes, has caused several pandemics. To better prepare for the emergence of new subtypes and the possible threat of the next pandemic, the global status of animal influenza must be defined and documented. We created a global database of animal influenza events by searching scientific databases and the primary literature on animal influenza-related events up to and including 2016. The temporal, spatial and host distribution of animal influenza and the diversity of influenza subtypes in different regions were analyzed. A total of 70,472 records and 4712 events of animal influenza throughout the world were identified. Events involving subtypes H5N2, H7N7 and H7N9 were relatively constant, with a slow upward trend during the past decade. Asia was the region with the most clusters of events. Poultry was the main host reported in Asia and Africa, and wild birds in Europe and North America. We found that wild birds carried a very rich array of virus subtypes, a warning for the possible generation of reassortment viruses with pandemic potential. Influenza virus subtype diversity - a risk for virus reassortment - was greatest in Asia, North America and Europe. Our database provides a comprehensive overview of the historical and current status of animal influenza events throughout the world. Influenza surveillance needs to be strengthened in some countries and regions to prevent the emergence of new subtypes. Importantly, improvement of the global influenza surveillance system and structures to enable sharing of surveillance data is very much needed to prepare for the next pandemic.

Supporting text Virus Host Location
Animal influenza 1 Diversity 11 Influenza surveillance 1 Spatio-temporal distribution 1 Virus subtypes 1

Evidence records

3 total
Zoonotic Surveillance
3 records · 1 evidence types
Evidence type
3 records
OVE7118
Key finding

Animal influenza surveillance identified virus subtype H5N2 in animals throughout the world.

Virus
Host
Not specified
Location
Supporting text

A total of 70,472 records and 4712 events of animal influenza throughout the world were identified. Events involving subtypes H5N2, H7N7 and H7N9 were relatively constant, with a slow upward trend during the past decade.

Method
database-based surveillance analysis | review of scientific databases and primary literature
Sample type
surveillance records | animal influenza events
Geographic raw
throughout the world
OVE7119
Key finding

Animal influenza surveillance detected subtype H7N7 in animals throughout the world.

Virus
Host
Not specified
Location
Supporting text

A total of 70,472 records and 4712 events of animal influenza throughout the world were identified. Events involving subtypes H5N2, H7N7 and H7N9 were relatively constant, with a slow upward trend during the past decade.

Method
database-based surveillance analysis | review of scientific databases and primary literature
Sample type
surveillance records | animal influenza events
Geographic raw
throughout the world
OVE7120
Key finding

Animal influenza surveillance detected subtype H7N9 in animals throughout the world.

Virus
Host
Not specified
Location
Supporting text

A total of 70,472 records and 4712 events of animal influenza throughout the world were identified. Events involving subtypes H5N2, H7N7 and H7N9 were relatively constant, with a slow upward trend during the past decade.

Method
database-based surveillance analysis | review of scientific databases and primary literature
Sample type
surveillance records | animal influenza events
Geographic raw
throughout the world