Literature detail

North American perspective on the highly pathogenic avian influenza H5Nx clade 2.3.4.4b outbreak (November 2021 - March 2025).

Jolene A Giacinti1,2 Anthony Signore3,4 Mia Torchetti5,6 Hector Enrique Valdez-Gómez7,8 Carlos Javier Alcazar-Ramiro7,9 Yohannes Berhane10,11 Sarah Bevins12,13 Krista Dilione12,14 Damien O Joly15,16 Mario Solís-Hernández7,17 Trevor Thompson18,19 Mitzunari Zalapa-Hernández7,20
Affiliations 20 institutions
  1. Environment and Climate Change Canada, Burlington, Ontario, Canada
  2. [email protected].
  3. National Centre for Foreign Animal Disease, Winnipeg, Manitoba, Canada
  4. [email protected].
  5. APHIS National Veterinary Services Laboratories, U.S. Department of Agriculture, Ames, Iowa, United States
  6. [email protected].
  7. Comisión México-Estados Unidos para la Prevención de la Fiebre Aftosa y Otras Enfermedades Exóticas de los Animales Nacional de Sanidad, Mexico City, Mexico
  8. [email protected].
  9. [email protected].
  10. Canadian Food Inspection Agency, National Centre for Foreign Animal Disease, Winnipeg, Manitoba, Canada
  11. [email protected].
  12. U.S. Department of Agriculture, National Wildlife Disease Program, Fort Collins, Colorado, United States
  13. [email protected].
  14. [email protected].
  15. Canadian Wildlife Health Cooperative National Office, Saskatoon, Saskatchewan, Canada
  16. [email protected].
  17. [email protected].
  18. Environment and Climate Change Canada, Gatineau, Quebec, Canada
  19. [email protected].
  20. [email protected].
PMID 42114152 2026 Can J Microbiol eng aheadofprint
PubMed DOI Browse context

Article

Publication summary

Influenza A (H5Nx) highly pathogenic avian influenza viruses of clade 2.3.4.4b were first detected in North America in late 2021, initiating a multi-year outbreak unprecedented in geographic extent, duration, and host range. Surveillance conducted across Canada, the United States, and Mexico has documented widespread detections in wild birds and poultry, and repeated spillover into wild and domestic mammals. Genomic analyses reveal successive lineage replacements and extensive reassortment between Eurasian and North American lineages, with over 100 distinct genotypes identified to date. Recent events, including detection of genotype B3.13 in United States dairy cattle and the emergence of genotype D1.1 across all four North American migratory bird flyways, highlight ongoing viral evolution and cross-species transmission risks. This synthesis provides a continental overview of the outbreak from November 1, 2021, to March 31, 2025, summarizing surveillance results and genomic trends to inform continued One Health preparedness and response efforts.

Structured evidence records

Evidence records

3 total
1 records
Extraction confidence 0.90
Key finding

Detection of H5Nx clade 2.3.4.4b genotype B3.13 in United States dairy cattle indicates avian-origin influenza virus transmission into mammals.

Virus
Not specified
Host
Location
Supporting text

‘Recent events, including detection of genotype B3.13 in United States dairy cattle … highlight ongoing viral evolution and cross-species transmission risks.’

Method
genomic detection
Study design
field surveillance
Transmission direction
animal-to-animal
Event type
avian-to-mammal transmission
Geographic raw
United States
Country inferred
USA
1 records
Extraction confidence 0.93
Key finding

Successive lineage replacements and extensive reassortment between Eurasian and North American H5Nx lineages generated over 100 distinct genotypes during the outbreak.

Virus
Not specified
Host
Not specified
Location
Supporting text

‘Genomic analyses reveal successive lineage replacements and extensive reassortment between Eurasian and North American lineages, with over 100 distinct genotypes identified to date.’

Method
genomic analyses
Study design
comparative genomics
Transmission direction
molecular mechanism only
Event type
lineage replacement and reassortment
Geographic raw
North America | Eurasia
Mechanism types
reassortment
1 records
Extraction confidence 0.92
Key finding

Surveillance across North America documented widespread detections of H5Nx clade 2.3.4.4b viruses in wild birds and poultry, with repeated spillover events into wild and domestic mammals.

Virus
Not specified
Location
Supporting text

‘Surveillance conducted across Canada, the United States, and Mexico has documented widespread detections in wild birds and poultry, and repeated spillover into wild and domestic mammals.’

Method
genomic analyses | virus detection
Study design
field surveillance
Transmission direction
animal reservoir only
Event type
continental outbreak surveillance
Geographic raw
Canada | United States | Mexico
Country inferred
CAN | USA | MEX