Discovery of hantaviruses in bats and insectivores and the evolution of the genus Hantavirus.

Yong-Zhen Zhang1
Affiliations 1 institutions
  1. State Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China. Electronic address: [email protected].

Abstract

Hantaviruses are among the most important zoonotic pathogens of humans, causing either hemorrhagic fever with renal syndrome (HFRS) or hantavirus pulmonary syndrome (HPS). From the period 1964-2006 almost all hantaviruses had been identified in rodents, with the exception of Thottapalayam virus (TPMV) isolated from shrews sampled in India. As a consequence, rodents were considered as the natural reservoir hosts. However, over the past seven years, most of the newly found hantavirus genotypes have been from either shrews or moles. Remarkably, in recent years divergent hantaviruses have also been identified in bats sampled from both Africa and Asia. All these data indicate that hantaviruses have a broad range of natural reservoir hosts. Phylogenetic analyses of the available sequences of hantaviruses suggest that hantaviruses might have first appeared in Chiroptera (bats) or Soricomorpha (moles and shrews), before emerging in rodent species. Although rodent hantaviruses cluster according to whether their hosts are members of the Murinae and Cricetidae, the phylogenetic histories of the viruses are not always congruent with those of their hosts, indicating that cross-species transmission events have occurred at all taxonomic levels. In sum, both cross-species transmission and co-divergence have produced the high genetic diversity of hantaviruses described to date.

Supporting text Virus Host Location
Bat 54 Co-divergence 1 Cross-species transmission 75 Evolution 62 Hantavirus 7 Insectivore 3 Phylogeny 805 Africa 16 Animals 1948 Asia 13 Biological Evolution 28 Chiroptera 371 Genetic Variation 127 Hantavirus Infections 16 Host Specificity 132 Host-Pathogen Interactions 55 Moles 2 Orthohantavirus 18 Shrews 15

Evidence records

4 total
Zoonotic Surveillance
2 records · 2 evidence types
Evidence type
1 records
OVE1674
Key finding

Divergent hantaviruses were detected in bats sampled from both Africa and Asia.

Virus
Host
Location
Supporting text

Remarkably, in recent years divergent hantaviruses have also been identified in bats sampled from both Africa and Asia.

Method
viral genome identification | sequence detection
Geographic raw
Africa | Asia
Evidence type
1 records
OVE1675
Key finding

Hantaviruses maintain natural reservoirs in multiple mammalian hosts including shrews, moles, and bats rather than rodents alone.

Virus
Host
Location
Not specified
Supporting text

All these data indicate that hantaviruses have a broad range of natural reservoir hosts including shrews, moles, and bats, not only rodents.

Method
phylogenetic analysis | host association comparison
Genomic Evolution
2 records · 1 evidence types
Evidence type
2 records
OVE1676
Key finding

Phylogenetic analyses indicate that hantaviruses may have originated in bats or insectivores before diversifying into rodent-associated lineages.

Virus
Host
Location
Not specified
Supporting text

Phylogenetic analyses of the available sequences of hantaviruses suggest that hantaviruses might have first appeared in Chiroptera (bats) or Soricomorpha (moles and shrews), before emerging in rodent species.

Analysis methods
phylogenetic analyses
OVE1677
Key finding

Phylogenetic analyses indicate cross-species transmission of rodent hantaviruses between Murinae and Cricetidae hosts.

Virus
Host
Location
Not specified
Supporting text

Although rodent hantaviruses cluster according to whether their hosts are members of the Murinae and Cricetidae, the phylogenetic histories of the viruses are not always congruent with those of their hosts, indicating that cross-species transmission events have occurred at all taxonomic levels.

Analysis methods
phylogenetic comparison | host-virus relationship analysis