Molecular characterization of rotaviruses in a Japanese raccoon dog (Nyctereutes procyonoides) and a masked palm civet (Paguma larvata) in Japan.

Masako Abe1 Ari Yamasaki Naoto Ito Toshio Mizoguchi Makoto Asano Tsukasa Okano Makoto Sugiyama
Affiliations 1 institutions
  1. The United Graduate School of Veterinary Sciences, Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan.

Abstract

Group A rotaviruses infect and cause diarrhea in humans and a wide range of mammals. Previous studies have suggested that some strains can cross the species barrier to infect humans (Martella et al., 2010). However, there are few reports on infection and characterization of rotaviruses in wild animals. To estimate what types of rotaviruses infect wild animals, we investigated infection of rotaviruses in wild animals living in urban areas in Japan between 2003 and 2008. Of 145 fecal specimens obtained, we detected rotaviruses in one sample from a Japanese raccoon dog (Nyctereutes procyonoides) (RAC-DG5) and in one sample from a masked palm civet (Paguma larvata) (MP-CIVET66) by RT-semi-nested PCR. Sequence analyses of the VP4 and VP7 genes of RAC-DG5 and MP-CIVET66 strains revealed that these strains belong to G3bP[9] genotype. Furthermore, phylogenetic analyses showed that RAC-DG5 and MP-CIVET66 strains were closely related to human and feline rotaviruses, suggesting interspecies transmission from humans or cats. To our knowledge, this is the first report on the detection and characterization of rotaviruses in a Japanese raccoon dog and masked palm civet. These findings show that wild animals constitute a potential zoonotic risk of rotaviruses.

Supporting text Virus Host Location
Animals 1948 Animals, Wild 187 Antigens, Viral 49 Capsid Proteins 21 Humans 1440 Japan 12 Molecular Sequence Data 160 Phylogeny 805 Raccoon Dogs 6 Rotavirus 65 Viverridae 12 VP4 protein, Rotavirus 5 VP7 protein, Rotavirus 7

Evidence records

4 total
Zoonotic Surveillance
2 records · 1 evidence types
Evidence type
2 records
OVE820
Key finding

Rotavirus RNA was detected by RT-semi-nested PCR in fecal samples from a Japanese raccoon dog in Japan.

Virus
Host
Location
Supporting text

We investigated infection of rotaviruses in wild animals living in urban areas in Japan between 2003 and 2008. Of 145 fecal specimens obtained, we detected rotaviruses in one sample from a Japanese raccoon dog (Nyctereutes procyonoides) (RAC-DG5) by RT-semi-nested PCR.

Method
RT-semi-nested PCR
Sample type
fecal specimens
Geographic raw
Japan
Country inferred
JPN
OVE821
Key finding

Rotavirus RNA was detected by RT-semi-nested PCR in fecal samples from a masked palm civet in Japan.

Virus
Host
Location
Supporting text

We investigated infection of rotaviruses in wild animals living in urban areas in Japan between 2003 and 2008. Of 145 fecal specimens obtained, we detected rotaviruses in one sample from a masked palm civet (Paguma larvata) (MP-CIVET66) by RT-semi-nested PCR.

Method
RT-semi-nested PCR
Sample type
fecal specimens
Geographic raw
Japan
Country inferred
JPN
Genomic Evolution
2 records · 1 evidence types
Evidence type
2 records
OVE822
Key finding

Phylogenetic analyses of VP4 and VP7 sequences showed that the RAC-DG5 rotavirus strain from a Japanese raccoon dog belongs to genotype G3bP[9] and is closely related to human and feline rotaviruses.

Virus
Host
Location
Not specified
Supporting text

We detected rotaviruses in one sample from a Japanese raccoon dog (Nyctereutes procyonoides) (RAC-DG5) by RT-semi-nested PCR. Sequence analyses of the VP4 and VP7 genes of RAC-DG5 revealed that this strain belongs to G3bP[9] genotype. Furthermore, phylogenetic analyses showed that RAC-DG5 was closely related to human and feline rotaviruses, suggesting interspecies transmission from humans or cats.

Genes or proteins
VP4 | VP7
Analysis methods
sequence analysis | phylogenetic analysis
OVE823
Key finding

Phylogenetic analyses of VP4 and VP7 sequences showed that the MP-CIVET66 rotavirus strain from a masked palm civet belongs to genotype G3bP[9] and is closely related to human and feline rotaviruses.

Virus
Host
Location
Not specified
Supporting text

We detected rotaviruses in one sample from a masked palm civet (Paguma larvata) (MP-CIVET66) by RT-semi-nested PCR. Sequence analyses of the VP4 and VP7 genes of MP-CIVET66 revealed that this strain belongs to G3bP[9] genotype. Furthermore, phylogenetic analyses showed that MP-CIVET66 was closely related to human and feline rotaviruses, suggesting interspecies transmission from humans or cats.

Genes or proteins
VP4 | VP7
Analysis methods
sequence analysis | phylogenetic analysis