Literature detail

Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.

Soumitra Roy1 Luk H Vandenberghe Sergey Kryazhimskiy Rebecca Grant Roberto Calcedo Xin Yuan Martin Keough Arbans Sandhu Qiang Wang C Angelica Medina-Jaszek Joshua B Plotkin James M Wilson
Affiliations 1 institutions
  1. Department of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA, USA.
PMID 19578438 2009 PLoS Pathog eng ppublish
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Article

Publication summary

Adenoviruses are important human pathogens that have been developed as vectors for gene therapies and genetic vaccines. Previous studies indicated that human infections with adenoviruses are self-limiting in immunocompetent hosts with evidence of some persistence in adenoid tissue. We sought to better understand the natural history of adenovirus infections in various non-human primates and discovered that healthy populations of great apes (chimpanzees, bonobos, gorillas, and orangutans) and macaques shed substantial quantities of infectious adenoviruses in stool. Shedding in stools from asymptomatic humans was found to be much less frequent, comparable to frequencies reported before. We purified and fully sequenced 30 novel adenoviruses from apes and 3 novel adenoviruses from macaques. Analyses of the new ape adenovirus sequences (as well as the 4 chimpanzee adenovirus sequences we have previously reported) together with 22 complete adenovirus genomes available from GenBank revealed that (a) the ape adenoviruses could clearly be classified into species corresponding to human adenovirus species B, C, and E, (b) there was evidence for intraspecies recombination between adenoviruses, and (c) the high degree of phylogenetic relatedness of adenoviruses across their various primate hosts provided evidence for cross species transmission events to have occurred in the natural history of B and E viruses. The high degree of asymptomatic shedding of live adenovirus in non-human primates and evidence for zoonotic transmissions warrants caution for primate handling and housing. Furthermore, the presence of persistent and/or latent adenovirus infections in the gut should be considered in the design and interpretation of human and non-human primate studies with adenovirus vectors.

Adenoviridae Adenoviridae Infections Africa Animals Animals, Zoo Feces Gastrointestinal Tract Genes, Viral Hominidae Macaca Molecular Sequence Data Phylogeny Polymerase Chain Reaction Recombination, Genetic

Structured evidence records

Evidence records

5 total
2 records
Extraction confidence 0.80
Key finding

Healthy great apes and macaques were found to shed infectious adenoviruses in stool, providing evidence of adenovirus persistence and zoonotic surveillance of non-human primate hosts.

Virus
Host
Location
Supporting text

We discovered that healthy populations of great apes (chimpanzees, bonobos, gorillas, and orangutans) and macaques shed substantial quantities of infectious adenoviruses in stool.

Method
isolation; sequencing; PCR
Sample type
stool
Geographic raw
Africa
Extraction confidence 0.80
Key finding

Novel adenoviruses were detected and sequenced from stool samples of macaques, indicating active surveillance of adenoviruses in non-human primates.

Virus
Host
Location
Supporting text

We purified and fully sequenced 30 novel adenoviruses from apes and 3 novel adenoviruses from macaques.

Method
sequencing; PCR
Sample type
stool
Geographic raw
Africa
1 records
Extraction confidence 0.95
Key finding

Adenoviruses from great apes and macaques showed phylogenetic relatedness consistent with cross-species transmission among non-human primate hosts for adenovirus species B and E.

Virus
Location
Supporting text

Analyses of the new ape adenovirus sequences together with 22 complete adenovirus genomes available from GenBank revealed that the high degree of phylogenetic relatedness of adenoviruses across their various primate hosts provided evidence for cross species transmission events to have occurred in the natural history of B and E viruses.

Method
sequencing
Study design
phylogenetic analysis
Transmission direction
animal-to-animal
Geographic raw
Africa
1 records
Extraction confidence 0.90
Key finding

Sequencing and phylogenetic analysis showed that ape adenoviruses belong to human adenovirus species B, C, and E, exhibiting recombination and cross-species transmission among primate hosts.

Virus
Location
Not specified
Supporting text

We purified and fully sequenced 30 novel adenoviruses from apes and 3 novel adenoviruses from macaques. Analyses of the new ape adenovirus sequences together with 22 complete adenovirus genomes available from GenBank revealed that the ape adenoviruses could clearly be classified into species corresponding to human adenovirus species B, C, and E, with evidence for intraspecies recombination, and the high degree of phylogenetic relatedness across primate hosts indicated cross species transmission events.

Genes or proteins
whole genome
Analysis methods
genome sequencing; phylogenetic analysis; comparative genomics
1 records
Extraction confidence 0.90
Key finding

Ape adenoviruses showed intraspecies recombination, and this recombination was observed alongside evidence of cross-species transmission among primate hosts.

Virus
Host
Not specified
Location
Not specified
Supporting text

Analyses of the new ape adenovirus sequences together with 22 complete adenovirus genomes available from GenBank revealed that (a) the ape adenoviruses could clearly be classified into species corresponding to human adenovirus species B, C, and E, (b) there was evidence for intraspecies recombination between adenoviruses, and (c) the high degree of phylogenetic relatedness of adenoviruses across their various primate hosts provided evidence for cross species transmission events to have occurred in the natural history of B and E viruses.

Event type
recombination