Isolation and characterization of novel reassortant H6N1 avian influenza viruses from chickens in Eastern China.

Haibo Wu1 Fan Yang1 Fumin Liu1 Rufeng Lu2 Xiuming Peng1 Bin Chen1 Hangping Yao1 Nanping Wu3
Affiliations 3 institutions
  1. State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, the First Affiliated Hospital, School of Medicine, Zhejiang University, 79 Qingchun Road, Zhejiang, 310003, Hangzhou, China.
  2. Department of Emergency, The First Affiliated Hospital of Zhejiang Chinese Medical University, Hangzhou, China.
  3. State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, the First Affiliated Hospital, School of Medicine, Zhejiang University, 79 Qingchun Road, Zhejiang, 310003, Hangzhou, China. [email protected].

Abstract

The H6N1 subtype of avian influenza viruses (AIVs) can infect people with an influenza-like illness; the H6N1 viruses possess the ability for zoonotic transmission from avians into mammals, and possibly pose a threat to human health. In 2017, live poultry markets (LPMs) in Zhejiang Province were surveyed for AIVs. To better understand the genetic relationships between these strains from Eastern China and other AIVs, all gene segments of these strains were sequenced and compared with sequences available in GenBank. In this study, we analyzed the receptor-binding specificity, antigenic characteristics, and pathogenicity of these two H6N1 viruses. In 2017, two H6N1 AIVs were isolated from chickens during surveillance for AIVs in LPMs in Eastern China. Phylogenetic analysis showed that these strains shared genetic characteristics from H6, H10, H1, and H4 AIVs found in ducks and wild birds in East Asia. These AIV strains were able to replicate in mice without prior adaptation. In this study, we report the discovery of new strains of H6N1 viruses from chickens with novel gene reassortments. Our results suggest that these chickens play an important role generating novel reassortments in AIVs, and emphasize the need for continued surveillance of AIV strains circulating in poultry.

Supporting text Virus Host Location
Avian influenza viruses 5 Chickens 146 Eastern China 1 Reassortant 13 Subtype H6N1 1 A549 Cells 14 Animals 1948 Chickens 146 China 229 Dogs 176 Female 289 Genome, Viral 317 Humans 1440 Influenza A virus 186 Influenza in Birds 341 Madin Darby Canine Kidney Cells 36 Mice 253 Mice, Inbred BALB C 73 Phylogeny 805 Reassortant Viruses 103 RNA, Viral 193

Evidence records

4 total
Zoonotic Surveillance
2 records · 2 evidence types
Evidence type
1 records
OVE3130
Key finding

Two H6N1 avian influenza viruses were successfully isolated from chickens during live poultry market surveillance in Eastern China in 2017.

Virus
Host
Location
Not specified
Supporting text

In 2017, two H6N1 AIVs were isolated from chickens during surveillance for AIVs in LPMs in Eastern China.

Sample type
live poultry market surveillance samples
Evidence type
1 records
OVE3133
Key finding

Chickens in Eastern China were identified as an ecological host population contributing to novel reassortant avian influenza viruses.

Virus
Host
Location
Supporting text

In 2017, two H6N1 AIVs were isolated from chickens during surveillance for AIVs in LPMs in Eastern China. Our results suggest that these chickens play an important role generating novel reassortments in AIVs.

Method
surveillance in live poultry markets | phylogenetic analysis | genome sequencing
Sample type
samples from live poultry markets
Geographic raw
Eastern China
Country inferred
CHN
Experimental Infection
1 records · 1 evidence types
Evidence type
1 records
OVE3131
Key finding

H6N1 avian influenza viruses isolated from chickens were able to replicate in mice without prior adaptation.

Virus
Host
Location
Not specified
Supporting text

Two H6N1 AIVs were isolated from chickens during surveillance for AIVs in LPMs in Eastern China. These AIV strains were able to replicate in mice without prior adaptation.

Method
experimental infection | virus replication assay
Experimental system
in vivo mouse infection model
Genomic Evolution
1 records · 1 evidence types
Evidence type
1 records
OVE3132
Key finding

Novel H6N1 avian influenza viruses isolated from chickens in Eastern China were reassortants containing gene segments derived from H6, H10, H1, and H4 avian influenza viruses found in ducks and wild birds in East Asia.

Virus
Host
Not specified
Location
Not specified
Supporting text

Phylogenetic analysis showed that these strains shared genetic characteristics from H6, H10, H1, and H4 AIVs found in ducks and wild birds in East Asia.

Event type
reassortment