Literature detail

<i>In silico</i> analysis of ACE2 orthologues to predict animal host range with high susceptibility to SARS-CoV-2.

El Mehdi Bouricha1 Mohammed Hakmi1 Jihane Akachar1 Lahcen Belyamani2 Azeddine Ibrahimi1
Affiliations 2 institutions
  1. Medical Biotechnology Laboratory (MedBiotech), Rabat Medical and Pharmacy School, Mohammed Vth University in Rabat, Rabat, Morocco.
  2. Emergency Department, Military Hospital Mohammed V, Rabat Medical and Pharmacy School, Mohammed Vth University in Rabat, Rabat, Morocco.
PMID 33101829 2020 3 Biotech eng ppublish
PubMed DOI Browse context

Article

Publication summary

SARS-CoV-2, which causes severe pneumonia epidemics, probably originated from Chinese horseshoe bats, but the intermediate and host range is still unknown. ACE2 is the entry receptor for SARS-CoV-2. The binding capacity of SARS-CoV-2 spike protein to ACE2 is the critical determinant of viral host range and cross-species infection. Here, we used an <i>in silico</i> approach to predict the potential animals range with high susceptibility to SARS-CoV-2 by modelling and studying the Spike-ACE2 interaction of 22 domestic and wild animals. Our results showed that all studied animals are potentially susceptible to SARS-CoV-2 infection with a slight difference in the binding affinity and stability of their ACE2-RBD complexes. Furthermore, we identified a specific substitution of tyrosine to histidine at position 41 in ACE2 that likely reduces the affinity to SARS-CoV-2 in horses and greater horseshoe bats. These results may help to provide important insights into SARS-CoV-2 host range which will make it possible to control the spread of the virus and identify animal models that could be used for screening antiviral drugs or vaccine candidates against SARS-CoV-2.

ACE2 orthologues COVID-19 Host range SARS-CoV-2 susceptibility

Structured evidence records

Evidence records

3 total
1 records
Extraction confidence 0.70
Key finding

In silico modeling of Spike-ACE2 interaction across ACE2 orthologues from 22 domestic and wild animals predicted widespread susceptibility to SARS-CoV-2 with variation in binding affinity.

Virus
Host
Not specified
Location
Not specified
Supporting text

Here, we used an in silico approach to predict the potential animals range with high susceptibility to SARS-CoV-2 by modelling and studying the Spike-ACE2 interaction of 22 domestic and wild animals.

Method
Spike-ACE2 interaction modeling
Experimental system
in silico modeling
1 records
Extraction confidence 0.90
Key finding

A Y41H substitution in ACE2 of horses and greater horseshoe bats decreases SARS-CoV-2 spike binding affinity, affecting host susceptibility.

Virus
Host
Not specified
Location
Not specified
Supporting text

A specific substitution of tyrosine to histidine at position 41 in ACE2 likely reduces the affinity to SARS-CoV-2 in horses and greater horseshoe bats.

Genes or proteins
ACE2; spike
Receptors
ACE2
Mutations
ACE2 Y41H
Mechanism types
receptor_binding; host_factor_interaction
1 records
Extraction confidence 0.95
Key finding

SARS-CoV-2 spike binds ACE2 across multiple species, and the Y41H substitution in ACE2 from horses and greater horseshoe bats decreases binding affinity.

Virus
Location
Not specified
Supporting text

ACE2 is the entry receptor for SARS-CoV-2. The binding capacity of SARS-CoV-2 spike protein to ACE2 is the critical determinant of viral host range and cross-species infection. By modelling the Spike-ACE2 interaction of 22 domestic and wild animals, the study found that a Y41H substitution in ACE2 may reduce affinity to SARS-CoV-2 in horses and greater horseshoe bats.

Method
in silico modeling; Spike-ACE2 interaction analysis
Receptors
ACE2