Literature detail

Genetic and biological characterization of a duck-origin clade 2.3.4.4b H5N6 avian influenza virus reveals partial mammalian adaptation.

Xinlan Zhang1,2,3 Jing Chen1,2,3 Zhichuang Ge1,2,3 Xiaolong Lu1,2,3 Yu Chen1,2,3 Jiao Hu1,2,3 Xiaowen Liu1,2,3 Shunlin Hu1,2,3 Kaituo Liu1,2,3 Xiaoquan Wang1,2,3 Pinghu Zhang4 Min Gu1,2,3 Ruyi Gao1,2,5 Xiufan Liu1,2,3
Affiliations 5 institutions
  1. Key Laboratory of Avian Bioproducts Development, Ministry of Agriculture and Rural Affairs, College of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China
  2. Jiangsu Co-innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonosis, Yangzhou University, Yangzhou 225009, China
  3. Jiangsu Key Laboratory of Zoonosis, Yangzhou 225009, China.
  4. College of Medicine, Yangzhou University, Yangzhou 225009, China.
  5. Jiangsu Key Laboratory of Zoonosis, Yangzhou 225009, China. Electronic address: [email protected].
PMID 41946007 2026 Vet Microbiol eng aheadofprint
PubMed DOI Browse context

Article

Publication summary

Clade 2.3.4.4b H5Nx highly pathogenic avian influenza viruses (HPAIVs) have caused extensive outbreaks in poultry worldwide. H5 HPAIVs have caused sporadic but severe human infections in China, representing a persistent zoonotic threat. Here, we identified a duck-origin H5N6 HPAIV (A/Duck/Jiangsu/628/2022) through routine surveillance and assessed its biological characteristics and mammalian pathogenesis. Phylogenetic analysis revealed > 98% nucleotide identity between strain 628 and the concurrent human H5N6 strain A/Yangzhou/125/2022. Molecular characterization identified multiple mammalian adaptation markers: hemagglutinin substitutions (S137A, T160A, T192I) associated with enhanced human receptor binding; neuraminidase mutations (I117T, D198N) linked to reduced neuraminidase inhibitor susceptibility; and polymerase complex changes (PB1-D622G, PA-K142Q) conferring increased mammalian cell replication. In vitro studies demonstrated that 628 virus replicated more efficiently in mammalian than in avian cells and exhibited dual receptor-binding specificity. Mouse pathogenicity assays revealed moderate virulence with progressive lung pathology. Critically, transmission experiments confirmed both direct contact and airborne transmission capabilities of 628 in guinea pigs. These findings demonstrate that circulating H5N6 viruses have acquired partial mammalian adaptation while retaining avian fitness, significantly elevating pandemic potential. Enhanced surveillance of wild bird populations, poultry farms, and live poultry markets is urgently needed to develop effective prevention and control strategies.

Duck-Origin H5N6 Pathogenicity Transmissibility

Structured evidence records

Evidence records

8 total
3 records
Extraction confidence 0.95
Key finding

Duck-origin H5N6 virus showed increased replication in mammalian cells and was transmissible by contact and airborne routes in guinea pigs, indicating cross-species host adaptation.

Virus
Location
Not specified
Supporting text

In vitro studies demonstrated that 628 virus replicated more efficiently in mammalian than in avian cells and exhibited dual receptor-binding specificity. Mouse pathogenicity assays revealed moderate virulence with progressive lung pathology. Critically, transmission experiments confirmed both direct contact and airborne transmission capabilities of 628 in guinea pigs.

Method
replication assay
Experimental system
in vitro cell culture
Extraction confidence 0.95
Key finding

Duck-origin H5N6 virus caused moderate disease and lung pathology in experimentally infected mice.

Virus
Location
Not specified
Supporting text

Mouse pathogenicity assays revealed moderate virulence with progressive lung pathology.

Method
experimental infection; pathogenicity assay
Sample type
lung
Experimental system
in vivo animal experiment
Extraction confidence 0.95
Key finding

Duck-origin H5N6 virus transmitted among guinea pigs via both direct contact and airborne routes, demonstrating mammalian transmissibility.

Virus
Location
Not specified
Supporting text

Transmission experiments confirmed both direct contact and airborne transmission capabilities of 628 in guinea pigs.

Method
transmission experiment
Experimental system
in vivo animal experiment
1 records
Extraction confidence 0.92
Key finding

A duck-origin clade 2.3.4.4b H5N6 avian influenza virus was able to transmit by direct contact and airborne routes among guinea pigs, showing animal-to-animal cross-species transmissibility.

Virus
Location
Supporting text

Transmission experiments confirmed both direct contact and airborne transmission capabilities of 628 in guinea pigs.

Method
transmission experiment; pathogenicity assay
Study design
animal experiment
Transmission direction
animal-to-animal
Geographic raw
Jiangsu
Country inferred
China
1 records
Extraction confidence 0.88
Key finding

Phylogenetic and molecular analysis showed that the duck-origin H5N6 virus was closely related to a human H5N6 strain and contained multiple mutations associated with mammalian adaptation.

Virus
Host
Location
Not specified
Supporting text

Phylogenetic analysis revealed > 98% nucleotide identity between strain 628 and the concurrent human H5N6 strain A/Yangzhou/125/2022. Molecular characterization identified multiple mammalian adaptation markers: hemagglutinin substitutions (S137A, T160A, T192I)... neuraminidase mutations (I117T, D198N)... and polymerase complex changes (PB1-D622G, PA-K142Q).

Genes or proteins
hemagglutinin; neuraminidase; polymerase complex; PB1; PA
Analysis methods
phylogenetic analysis; molecular characterization
1 records
Extraction confidence 0.98
Key finding

The duck-origin H5N6 virus exhibited hemagglutinin, neuraminidase, and polymerase mutations corresponding to partial adaptation to mammalian hosts through enhanced receptor binding, drug resistance, and improved replication efficiency.

Virus
Host
Not specified
Location
Not specified
Supporting text

Molecular characterization identified multiple mammalian adaptation markers: hemagglutinin substitutions (S137A, T160A, T192I) associated with enhanced human receptor binding; neuraminidase mutations (I117T, D198N) linked to reduced neuraminidase inhibitor susceptibility; and polymerase complex changes (PB1-D622G, PA-K142Q) conferring increased mammalian cell replication.

Genes or proteins
hemagglutinin; neuraminidase; polymerase complex; PB1; PA
Receptors
human receptor
Mutations
S137A; T160A; T192I; I117T; D198N; PB1-D622G; PA-K142Q
Mechanism types
receptor_binding; replication_efficiency; drug_resistance
1 records
Extraction confidence 0.85
Key finding

The duck-origin H5N6 virus contains HA mutations that enhance human receptor binding and demonstrate dual receptor-binding specificity consistent with partial mammalian receptor adaptation.

Virus
Location
Not specified
Supporting text

Molecular characterization identified multiple mammalian adaptation markers: hemagglutinin substitutions (S137A, T160A, T192I) associated with enhanced human receptor binding, and in vitro studies showed dual receptor-binding specificity.

Method
molecular characterization; in vitro replication assay
Receptors
human receptor
1 records
Extraction confidence 0.90
Key finding

A duck-origin H5N6 avian influenza virus was detected in Jiangsu, China via routine surveillance among ducks, reflecting active monitoring for zoonotic influenza circulation.

Virus
Host
Location
Supporting text

Here, we identified a duck-origin H5N6 HPAIV (A/Duck/Jiangsu/628/2022) through routine surveillance and assessed its biological characteristics and mammalian pathogenesis.

Geographic raw
Jiangsu
Country inferred
China