Literature detail

A novel genetically distinct Amdoparvovirus in Sorex araneus in the United Kingdom highlights an unexplored ancestral link.

Tiernan Briggs1 Dan Maskell2 Dan Henderson3 Courtney Graham3 Bill Mansfield4 David Jorge5 Audra-Lynne Schlachter5 Matthieu Bernard5 Rebecca Callaway5 Damian Osmond6 Joan Amaya-Cuesta6 Florian Pfaff7 Henry Ashpitel5 Graham Smith3 Yogesh Kumar Gupta2 Lorraine M McElhinney8,9 Mirjam Schilling2
Affiliations 9 institutions
  1. Genomics for Animal and Plant Health Disease Consortium, Animal and Plant Health Agency, Woodham Lane, Addlestone KT15 3NB, United Kingdom. Electronic address: [email protected].
  2. Genomics for Animal and Plant Health Disease Consortium, Animal and Plant Health Agency, Woodham Lane, Addlestone KT15 3NB, United Kingdom.
  3. National Wildlife Management Centre, Animal and Plant Health Agency, Sand Hutton, York, YO41 1LZ, United Kingdom.
  4. Waterlife Recovery Trust, The Courtyard, London Road, Horsham, West Sussex, RH12 1AT, United Kingdom.
  5. Pathology and Animal Sciences Department, Animal and Plant Health Agency, Addlestone, KT15 3NB, United Kingdom.
  6. Rabies and Viral Zoonoses Workgroup, Animal and Plant Health Agency, Woodham Lane, Addlestone KT15 3NB, United Kingdom.
  7. Friedrich-Loeffler-Institut, Institute of Diagnostic Virology, Südufer 10, 17493 Greifswald Insel Riems, Germany.
  8. Rabies and Viral Zoonoses Workgroup, Animal and Plant Health Agency, Woodham Lane, Addlestone KT15 3NB, United Kingdom
  9. Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, 146 Brownlow Hill, Liverpool, L3 5RF, United Kingdom.
PMID 42002046 2026 Virus Res eng ppublish
PubMed DOI Browse context

Article

Publication summary

Amdoparvoviruses have historically been documented almost exclusively in carnivorans, with a few recent detections in bats and rodents. However, endogenous viral elements in rodent genomes suggest a more ancient and taxonomically broader evolutionary history. Despite this, small mammals have never been systematically surveyed for extant amdoparvovirus infections. In this study, we used whole genome sequencing to screen four different shrew species and wild American mink in the UK, which may act as a reservoir host for amdoparvoviruses. We identified a highly divergent amdoparvovirus in native common shrews (Sorex araneus) from northern England, named Shrew parvovirus 1(SP 1). Classical amdoparvovirus sequences were also detected in wild American mink (Neogale vison), confirming the presence of known amdoparvovirus strains in UK mustelids. Phylogenetic analysis revealed that the shrew virus, SP 1, forms a distinct clade, suggesting ancient divergence or long-term cryptic circulation in small mammal reservoirs. These findings provide evidence towards the hypothesis that small mammals may act as a reservoir for amdoparvoviruses and underscore the importance of systematic wildlife surveillance for understanding viral host range evolution and assessing spillover risks.

Evolution Mink Parvoviridae Parvovirinae Reservoir Shrews Whole genome sequencing Parvoviridae Infections Shrews Animals Disease Reservoirs Evolution, Molecular Genome, Viral Host Specificity Mink Phylogeny United Kingdom Whole Genome Sequencing

Structured evidence records

Evidence records

3 total
2 records
Extraction confidence 0.93
Key finding

Whole genome sequencing identified a highly divergent amdoparvovirus, named Shrew parvovirus 1, in common shrews from northern England, indicating extant infection in small mammals.

Virus
Not specified
Host
Not specified
Location
Supporting text

We identified a highly divergent amdoparvovirus in native common shrews (Sorex araneus) from northern England, named Shrew parvovirus 1 (SP 1).

Method
whole genome sequencing | phylogenetic analysis
Sample type
wild shrews
Study design
genomic surveillance
Transmission direction
animal reservoir only
Event type
wildlife genomic surveillance
Geographic raw
United Kingdom | northern England
Country inferred
GBR
Extraction confidence 0.90
Key finding

Classical amdoparvovirus sequences were detected in wild American mink in the UK, confirming known amdoparvovirus strains in local mustelid populations.

Virus
Not specified
Host
Not specified
Location
Supporting text

Classical amdoparvovirus sequences were also detected in wild American mink (Neogale vison), confirming the presence of known amdoparvovirus strains in UK mustelids.

Method
whole genome sequencing
Sample type
wild mink
Study design
genomic surveillance
Transmission direction
animal reservoir only
Event type
wildlife genomic surveillance
Geographic raw
United Kingdom
Country inferred
GBR
1 records
Extraction confidence 0.88
Key finding

Phylogenetic analysis suggests the shrew amdoparvovirus forms a distinct clade consistent with ancient divergence or long-term cryptic circulation in small mammal reservoirs.

Virus
Not specified
Host
Location
Supporting text

Phylogenetic analysis revealed that the shrew virus, SP 1, forms a distinct clade, suggesting ancient divergence or long-term cryptic circulation in small mammal reservoirs.

Method
phylogenetic analysis | whole genome sequencing
Study design
field surveillance
Transmission direction
animal reservoir only
Event type
potential natural reservoir identification
Geographic raw
United Kingdom
Country inferred
GBR