Detection of FPV-like Carnivore protoparvovirus 1 in Procyon cancrivorus: Genomic evidence suggesting domestic-to-wild spillover in Argentina.

Danilo Bucafusco1,2 Melisa Unger3 Leandro Diaz4 Ana Bratanich4 Dario Amilcar Malacari5 Josefina Escardó6 Sofia Grecco6 Ruben Pérez6 Yanina Panzera6
Affiliations 6 institutions
  1. Universidad de Buenos Aires, Facultad de Ciencias Veterinarias, Cátedra de Virología, Buenos Aires, Argentina
  2. CONICET-Universidad de Buenos Aires, Instituto de Investigaciones en Producción Animal (INPA), Buenos Aires, Argentina. Electronic address: [email protected].
  3. Universidad de Buenos Aires, Facultad de Ciencias Veterinarias, Cátedra de Fisiología Animal y Bioquímica Fisiológica, Buenos Aires, Argentina.
  4. Universidad de Buenos Aires, Facultad de Ciencias Veterinarias, Cátedra de Virología, Buenos Aires, Argentina.
  5. Epizoolab, Buenos Aires, Argentina.
  6. Universidad de la República, Facultad de Ciencias, Instituto de Biología, Sección Genética Evolutiva, Montevideo, Uruguay.

Abstract

Carnivore protoparvovirus 1 (CPPV-1) is a significant pathogen of domestic carnivores, but its occurrence and genomic diversity in South American wildlife remain poorly characterized. Here we report the first detection and complete-genome characterization of an FPV-like CPPV-1 strain in a Procyon cancrivorus from Northeastern Argentina. Viral DNA was sequenced using tiling-tailed amplicons and NGS (95.4% genomic coverage, mean depth >1700×). Phylogenetic analysis of global genomes indicated that the P. cancrivorus strain clustered robustly within the FPV-like clade and was closely related to FPV variants circulating in domestic cats in Argentina. The CPPV-1 positive individual was clinically healthy, suggesting subclinical spillover at the wildlife-domestic interface. These findings extend the recognized host range of FPV-like parvoviruses in South America and underscore the need for genomic surveillance to monitor cross-species transmission at the wildlife-domestic interface.

Supporting text Virus Host Location
Carnivore protoparvovirus 1 1 Fauna silvestre 1 FPV-like 1 Genomic surveillance 10 Procyon cancrivorus 1 South America 8 Spillover 105 Sudamérica 1 Vigilancia genómica 1 Wildlife 48

Evidence records

4 total
Zoonotic Surveillance
2 records · 2 evidence types
Evidence type
1 records
OVE11801
Key finding

FPV-like Carnivore protoparvovirus 1 DNA was detected and genomically characterized from a Procyon cancrivorus in Northeastern Argentina.

Virus
Host
Natural host
Location
Supporting text

Here we report the first detection and complete-genome characterization of an FPV-like CPPV-1 strain in a Procyon cancrivorus from Northeastern Argentina.

Method
tiling-tailed amplicons | NGS
Geographic raw
Northeastern Argentina
Country inferred
ARG
Evidence type
1 records
OVE11804
Key finding

A clinically healthy Procyon cancrivorus carried CPPV-1, indicating subclinical infection at the wildlife–domestic interface.

Virus
Host
Natural host
Location
Not specified
Supporting text

The CPPV-1 positive individual was clinically healthy, suggesting subclinical spillover at the wildlife-domestic interface.

Method
genomic characterization | phylogenetic analysis
Transmission Evidence
1 records · 1 evidence types
Evidence type
1 records
OVE11803
Key finding

An FPV-like CPPV-1 detected in Procyon cancrivorus in Argentina was closely related to domestic cat FPV variants, suggesting domestic-to-wild spillover.

Virus
Host
Natural host
Location
Supporting text

Phylogenetic analysis of global genomes indicated that the P. cancrivorus strain clustered robustly within the FPV-like clade and was closely related to FPV variants circulating in domestic cats in Argentina. The CPPV-1 positive individual was clinically healthy, suggesting subclinical spillover at the wildlife-domestic interface.

Method
NGS complete-genome sequencing | tiling-tailed amplicons | phylogenetic analysis
Study design
wildlife case detection with genomic comparison
Transmission direction
animal-to-animal
Geographic raw
Argentina | Northeastern Argentina
Genomic Evolution
1 records · 1 evidence types
Evidence type
1 records
OVE11802
Key finding

The Procyon cancrivorus CPPV-1 genome clustered within the FPV-like clade and was closely related to FPV variants from domestic cats in Argentina.

Virus
Host
Natural host
Location
Not specified
Supporting text

Phylogenetic analysis of global genomes indicated that the P. cancrivorus strain clustered robustly within the FPV-like clade and was closely related to FPV variants circulating in domestic cats in Argentina.

Genes or proteins
complete-genome
Analysis methods
phylogenetic analysis of global genomes