Molecular detection, characterization, and cross-species circulation of feline and canine parvoviruses in Gujarat, India: Emergence of a novel canine parvovirus-2c variant and enhanced diagnostic sensitivity of quantitative polymerase chain reaction.

Fatimazohra Abdulrashidkhan Pathan1 Arunkumar C Patel1 Niyati M Rana1 Sejal P Antiya1 Prakash G Koringa2 Rafiyuddin A Mathakiya1 Vipul R Nimavat1 Ankit S Prajapati3
Affiliations 3 institutions
  1. Department of Veterinary Microbiology, College of Veterinary Science and Animal Husbandry, Kamdhenu University, Anand-388001, Gujarat, India.
  2. Department of Veterinary Biotechnology, College of Veterinary Science and Animal Husbandry, Kamdhenu University, Anand-388001, Gujarat, India.
  3. Department of Veterinary Medicine, College of Veterinary Science and Animal Husbandry, Kamdhenu University, Anand-388001, Gujarat, India.
Active Last checked 2026-09-29 03:30:36 Source: NCBI PubMed

Abstract

Feline parvovirus (FPV) and canine parvovirus (CPV) are highly contagious pathogens that cause severe enteritis in companion animals, leading to considerable morbidity and mortality, particularly in young and unvaccinated animals. The continuous evolution of CPV variants and increasing evidence of cross-species transmission present major challenges for disease diagnosis, surveillance, and control. This study aimed to determine the prevalence of FPV and CPV infections among cats and dogs in Gujarat, India, compare the diagnostic performance of rapid antigen testing (RAT), conventional polymerase chain reaction (PCR), and quantitative PCR (qPCR), characterize circulating viral variants through VP2 gene sequencing and phylogenetic analysis, and investigate evidence of cross-species circulation. A cross-sectional study was conducted between September 2024 and September 2025 using 200 fecal samples collected from 100 cats and 100 dogs presented to veterinary clinics, shelters, and rescue organizations in Gujarat, India. Samples were examined using RAT, conventional PCR targeting the VP2 gene, and duplex probe-based qPCR to differentially detect FPV and CPV. Representative positive samples were subjected to VP2 gene sequencing, phylogenetic analysis, and virus isolation in Crandell-Rees feline kidney cell cultures to evaluate viral replication. Epidemiological characteristics, including species, age, breed, vaccination status, and clinical presentation, were also assessed. RAT detected FPV and CPV in 10 (5.0%) and 80 (40.0%) samples, respectively, whereas conventional PCR identified 39 (19.5%) parvovirus-positive samples. Duplex qPCR demonstrated markedly superior sensitivity, detecting 124 (62.0%) positive samples, comprising 27 FPV and 97 CPV infections. Cross-species circulation was demonstrated by detection of CPV in 12% of cats and FPV in 1% of dogs. Sequencing of the VP2 gene revealed genetically conserved FPV isolates and predominance of CPV-2c among canine isolates, including a novel CPV-2c variant carrying unique amino acid substitutions suggestive of ongoing viral evolution. Virus isolation successfully confirmed replication in four of nine inoculated samples, producing characteristic cytopathic effects in Crandell-Rees feline kidney cells. FPV and CPV co-circulate among companion animals in Gujarat, with molecular evidence of cross-species transmission and predominance of CPV-2c variants. Duplex qPCR substantially outperformed RAT and conventional PCR, supporting its routine application for accurate diagnosis, epidemiological surveillance, and early detection of emerging parvovirus variants. Continuous molecular surveillance combined with sustained vaccination programs is essential to limit viral dissemination and improve control of parvoviral infections.

Supporting text Virus Host Location
canine parvovirus 1 cross-species transmission 81 feline parvovirus 1 molecular epidemiology 32 phylogenetic analysis 71 quantitative polymerase chain reaction 1 viral evolution 13 VP2 gene 1

Evidence records

4 total
Zoonotic Surveillance
2 records · 2 evidence types
Evidence type
1 records
OVE12039
Key finding

Infectious feline and canine parvoviruses were isolated from field samples, with replication confirmed in 4 of 9 inoculated samples showing cytopathic effects in CRFK cells.

Virus
Host
Natural host
Location
Not specified
Supporting text

Virus isolation successfully confirmed replication in four of nine inoculated samples, producing characteristic cytopathic effects in Crandell-Rees feline kidney cells.

Evidence type
1 records
OVE12037
Key finding

Duplex qPCR detected 124/200 parvovirus-positive fecal samples (27 FPV and 97 CPV), outperforming RAT and conventional PCR in cats and dogs in Gujarat, India.

Virus
Host
Location
Supporting text

This study aimed to determine the prevalence of FPV and CPV infections among cats and dogs in Gujarat, India, compare the diagnostic performance of rapid antigen testing (RAT), conventional polymerase chain reaction (PCR), and quantitative PCR (qPCR), characterize circulating viral variants through VP2 gene sequencing and phylogenetic analysis, and investigate evidence of cross-species circulation. Duplex qPCR demonstrated markedly superior sensitivity, detecting 124 (62.0%) positive samples, comprising 27 FPV and 97 CPV infections.

Method
rapid antigen testing (RAT) | conventional PCR (VP2 gene) | duplex probe-based qPCR
Sample type
fecal samples
Geographic raw
Gujarat, India
Country inferred
IND
Functional Mechanism
1 records · 1 evidence types
Evidence type
1 records
OVE12041
Key finding

A novel CPV-2c variant with unique VP2 amino acid substitutions was identified, indicating ongoing molecular evolution.

Virus
Host
Not specified
Location
Not specified
Supporting text

Sequencing of the VP2 gene revealed ... predominance of CPV-2c among canine isolates, including a novel CPV-2c variant carrying unique amino acid substitutions suggestive of ongoing viral evolution.

Genes or proteins
VP2
Mechanism types
host-range expansion | transmission fitness
Genomic Evolution
1 records · 1 evidence types
Evidence type
1 records
OVE12040
Key finding

VP2 phylogenetic characterization showed genetically conserved FPV and a predominance of CPV-2c among canine isolates, including a novel CPV-2c variant with unique amino acid substitutions.

Virus
Host
Location
Not specified
Supporting text

Sequencing of the VP2 gene revealed genetically conserved FPV isolates and predominance of CPV-2c among canine isolates, including a novel CPV-2c variant carrying unique amino acid substitutions suggestive of ongoing viral evolution.

Genes or proteins
VP2
Analysis methods
VP2 gene sequencing | phylogenetic analysis