A G4P[13] Porcine Rotavirus a Strain with Genomic Features Suggestive of Reassortment: Isolation, Genomic Characterization, and Pathogenicity in Piglets.

Xianyu Zhang1 Rui Geng2 Shengjin Liu3 Liguo Gao3 Qunhui Li4 Yongchang Cao2 Yu Wu3,4 Hanqin Shen1
Affiliations 4 institutions
  1. School of Food & Pharmaceutical Engineering, Zhaoqing University, Zhaoqing 526061, China.
  2. State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
  3. College of Animal Science, South China Agricultural University, Guangzhou 510642, China.
  4. Guangdong Provincial Enterprise Key Laboratory of Healthy Animal Husbandry and Environment Control, Wen's Foodstuff Group Co., Ltd., Yunfu 527400, China.
Active Last checked 2026-09-28 03:31:06 Source: NCBI PubMed

Abstract

Porcine rotavirus A (PoRVA) is an important cause of diarrhea in neonatal piglets, resulting in significant economic losses in the swine industry. In this study, a PoRVA strain, designated QY, was isolated from diarrheic piglets and systematically characterized. The virus was propagated in MA104 cells and identified by immunofluorescence assay and transmission electron microscopy, showing typical cytopathic effects and spherical particles of approximately 70 nm. Whole-genome sequencing and phylogenetic analysis revealed that QY was a G4P[13] strain with a genotype constellation of G4-P[13]-I1-C1-M1-R1-A8-N1-T1-E1-H1. Several genome segments showed close phylogenetic relationships with human- or bat-associated RVA strains, a pattern consistent with a possible reassortment history of QY. Experimental infection showed that QY caused watery diarrhea, intestinal lesions, and viral shedding in neonatal piglets under the experimental conditions used in this study. High viral loads were detected in small intestinal tissues, accompanied by villous atrophy and epithelial degeneration. These findings provide new insights into the genetic diversity and evolution of PoRVA and further characterize the pathogenicity of the G4P[13] QY strain in neonatal piglets.

Supporting text Virus Host Location
G4P[13] 1 pathogenicity 61 porcine rotavirus 2 RVA 1

Evidence records

4 total
Zoonotic Surveillance
1 records · 1 evidence types
Evidence type
1 records
OVE12238
Key finding

A Porcine rotavirus A strain (QY) was isolated from diarrheic piglets and successfully propagated in MA104 cells with characteristic CPE and confirmation by IFA and TEM.

Virus
Host
Location
Not specified
Supporting text

a PoRVA strain, designated QY, was isolated from diarrheic piglets... The virus was propagated in MA104 cells and identified by immunofluorescence assay and transmission electron microscopy, showing typical cytopathic effects

Sample type
piglets
Experimental Infection
1 records · 1 evidence types
Evidence type
1 records
OVE12240
Key finding

The PoRVA strain QY caused watery diarrhea, intestinal lesions, villous atrophy with epithelial degeneration, and high intestinal viral loads with shedding in experimentally infected neonatal piglets.

Virus
Host
Location
Not specified
Supporting text

Experimental infection showed that QY caused watery diarrhea, intestinal lesions, and viral shedding in neonatal piglets... High viral loads were detected in small intestinal tissues, accompanied by villous atrophy and epithelial degeneration.

Method
experimental infection | viral load detection | pathology/histopathology
Experimental system
experimental infection of neonatal piglets
Genomic Evolution
2 records · 2 evidence types
Evidence type
1 records
OVE12239
Key finding

The porcine rotavirus A strain QY shows multiple genome segments closely related to human- or bat-associated RVA strains, indicating a reassortment history.

Virus
Host
Not specified
Location
Not specified
Supporting text

Several genome segments showed close phylogenetic relationships with human- or bat-associated RVA strains, a pattern consistent with a possible reassortment history of QY.

Event type
reassortment
Evidence type
1 records
OVE12241
Key finding

Whole-genome phylogenetics assigned the PoRVA strain QY to genotype G4P[13] with the constellation G4-P[13]-I1-C1-M1-R1-A8-N1-T1-E1-H1.

Virus
Host
Not specified
Location
Not specified
Supporting text

Whole-genome sequencing and phylogenetic analysis revealed that QY was a G4P[13] strain with a genotype constellation of G4-P[13]-I1-C1-M1-R1-A8-N1-T1-E1-H1.

Genes or proteins
whole-genome
Analysis methods
whole-genome sequencing | phylogenetic analysis | genotype constellation assignment