Recent evidence findings

Evidence-grounded Research Brief · Past 3 months 56

Synthesizing linked evidence and source literature...

Generating an evidence-grounded brief with GPT-5...
16 source articles 17 hosts 4 countries
Publication date Category / type Key finding PMID
2026-10-09 Zoonotic Surveillance Serological Evidence A multiplex immunofluorescence assay was used to screen bat and rodent seroprevalence against 14 RNA viruses across seven families. 42853873
2026-10-05 Functional Mechanism Molecular Adaptation nsp12 mutations I171V, A185S, R249K, and N611S increased replication in a SARS-CoV-2 replicon in human-cell context. 42831623
2026-10-05 Genomic Evolution Phylogenetic Evolution Phylogenetic/comparative analysis of 183 bat SARS-related coronavirus nsp12 sequences identified mutation hotspots overlapping variable sites in human SARS-CoV-2 (including P323L), indicating shared functional constraints across hosts. 42831623
2026-10-05 Experimental Infection Host Range Experiment Specific bat SARS-related coronavirus nsp12 mutations enhanced viral replication in both bat and human cells in controlled assays. 42831623
2026-10-05 Functional Mechanism Molecular Adaptation Eight bat-derived nsp12 mutations increased polymerase activity at 37°C, with several also advantageous at 33°C or 40°C. 42831623
2026-10-05 Functional Mechanism Molecular Adaptation Adaptive nsp12 mutations map to RNA capping and RdRp catalytic core regions without altering remdesivir sensitivity. 42831623
2026-10 Zoonotic Surveillance Serological Evidence Sera from SARS-CoV-2 convalescent individuals robustly cross-neutralised clade 1 sarbecoviruses and showed limited cross-neutralisation across the broader sarbecovirus sub-genus. 42821519
2026-10 Functional Mechanism Receptor Usage Clade 1 sarbecoviruses, including SARS-CoV-2 and the BANAL isolates from Laos, show broad ACE2 usage, whereas clade 3 (RhGB07) and clade 5 (Rc-o319) exhibit restricted ACE2 usage. 42821519
2026-10 Experimental Infection Host Range Experiment Generalist sarbecoviruses maintained broad entry across a diverse mammalian ACE2 panel (human, non-human primate, livestock, rodent, and potential intermediate hosts), whereas specialists like RhGB07 showed more variable phenotypes. 42821519
2026-10 Zoonotic Surveillance Serological Evidence Monoclonal antibodies derived from COVID-19 vaccinees with breakthrough infections identified epitope classes mediating broader neutralisation. 42821519
2026-10 Functional Mechanism Receptor Usage SARS-CoV-2 variants, especially Omicron and its sub-lineages, display an expanding or shifting generalist pattern of ACE2 usage. 42821519
2026-09-24 Experimental Infection Pathogenicity Experiment In K18-hACE2 hamsters, MpCoV-GD caused lung pathology comparable to SARS-CoV-2, with extensive damage to the alveolar parenchyma. 42782103
2026-09-24 Experimental Infection Host Range Experiment Pangolin sarbecoviruses MpCoV-GX and MpCoV-GD replicate in human cells and organoids, though less efficiently than SARS-CoV-2. 42782103
2026-09-24 Experimental Infection Pathogenicity Experiment In K18-hACE2 hamsters, MpCoV-GX produced milder lung disease characterized mainly by alveolar wall thickening due to mild inflammatory cell infiltration. 42782103
2026-09-24 Experimental Infection Experimental Transmission MpCoV-GX transmitted via direct contact and aerosol in hACE2 transgenic hamsters, with infectivity attenuated during aerosol transmission. 42782103
2026-09-24 Functional Mechanism Receptor Usage Spike proteins from pangolin sarbecoviruses mediate cell–cell membrane fusion, with MpCoV-GD fusing more strongly than MpCoV-GX but weaker than SARS-CoV-2. 42782103
2026-09-23 Functional Mechanism Molecular Adaptation Host RBP NONO upregulates the MERS-CoV entry receptor DPP4 via epigenetic regulation, enabling MERS-CoV replication and entry. 42818199
2026-09-23 Functional Mechanism Receptor Usage MERS-CoV uses DPP4 (CD26) as the major cellular receptor required for attachment and entry. 42818199
2026-09-16 Functional Mechanism Receptor Usage Aminopeptidase N (APN) functions as a receptor for hedgehog merbecoviruses. 42749891
2026-09-16 Experimental Infection Host Range Experiment Hedgehog merbecoviruses could not use human aminopeptidase N (APN) and showed restricted use across 30 mammalian APN orthologues in receptor-entry assays. 42749891
2026-09-16 Experimental Infection Host Range Experiment Hedgehog coronavirus spike pseudotypes were more infectious when produced at 33 °C than at 37 °C. 42749891
2026-09-16 Functional Mechanism Receptor Usage Electron cryomicroscopy defined a distinct spike–APN interface for hedgehog merbecoviruses, explaining restricted cross-species receptor usage. 42749891
2026-09-16 Functional Mechanism Receptor Usage APN receptor usage by hedgehog merbecoviruses was validated using VSV-based pseudotype entry and protein binding assays. 42749891
2026-09-08 Zoonotic Surveillance Serological Evidence Pre-2019 human sera from wildlife hunter communities in Guinea showed IgG cross-reactivity to SARS-CoV, SARS-CoV-2, and MERS-CoV spike antigens. 42797820
2026-09-08 Zoonotic Surveillance Serological Evidence A subgroup of human sera from Guinea showed strong binding to both SARS-CoV and MERS-CoV receptor binding domains. 42797820
2026-08-31 Functional Mechanism Receptor Usage The SARS-CoV-2 Delta variant spike favors multivalent engagement of ACE2 via its three RBDs. 42671377
2026-08-31 Functional Mechanism Molecular Adaptation Later Omicron variants compensate a shift to predominantly single-site ACE2 engagement by increasing the stability of the RBD–ACE2 bond. 42671377
2026-08-31 Functional Mechanism Receptor Usage Later Omicron variants of SARS-CoV-2 predominantly use single-site ACE2 interactions, compensated by stronger RBD–ACE2 bond stability. 42671377
2026-08-31 Functional Mechanism Molecular Adaptation Spike conformational plasticity evolved from flexible early strains to rigidified Delta, fluctuating in Omicron, and compact JN.1, balancing receptor accessibility, mobility, and immune escape while maintaining entry efficiency. 42671377
2026-08-21 Experimental Infection Host Range Experiment RhGB01 and BM48-31 spikes utilized only Rhinolophus blasii ACE2 in entry assays. 42627230
2026-08-21 Functional Mechanism Receptor Usage ACE2 residues 31 and 41 modulate sarbecovirus spike–ACE2 interactions. 42627230
2026-08-21 Experimental Infection Host Range Experiment Cloned African Rhinolophus ACE2 variants were tested in a receptor-entry system against a panel of sarbecoviruses to assess susceptibility. 42627230
2026-08-21 Functional Mechanism Receptor Usage Specific ACE2 residues govern SARS-CoV-2 spike–ACE2 interactions and shape infectivity differences across species. 42627230
2026-08-12 Zoonotic Surveillance Viral Detection Betacoronavirus erinacei RNA was detected in European hedgehog fecal samples in Denmark with an overall prevalence of 23% (98/430), including 16% in 2016 and 29% in 2021–22. 42612403
2026-08-12 Zoonotic Surveillance Reservoir Ecology European hedgehogs were concluded to be unlikely maintenance hosts for SARS-CoV-2. 42612403
2026-08-12 Genomic Evolution Phylogenetic Evolution Betacoronavirus erinacei sequence types in Danish European hedgehogs showed genetic stability across sampling years and regions based on analysis of 55 sequence types. 42612403
2026-08-12 Zoonotic Surveillance Reservoir Ecology Exposure to pesticides, particularly herbicides, was positively associated with Betacoronavirus erinacei infection in European hedgehogs (p = 0.049). 42612403
2026-08-12 Zoonotic Surveillance Reservoir Ecology For Betacoronavirus erinacei in European hedgehogs, prevalence showed no association with location, habitat type, age, sex, inbreeding, endoparasite infection, or MRSA presence. 42612403
2026-08-02 Zoonotic Surveillance Viral Detection Porcine Hemagglutinating Encephalomyelitis Virus (PHEV) RNA was detected in 1.9% of 625 wild boar nasal swabs in Basilicata, Southern Italy using pan-coronavirus nested PCR targeting RdRp. 42655793
2026-08-02 Zoonotic Surveillance Reservoir Ecology Detection of PHEV in free-ranging wild boars in Southern Italy suggests potential viral circulation at the wildlife–livestock interface with domestic pig herds. 42655793
2026-07-29 Zoonotic Surveillance Viral Detection A MERS-related coronavirus (Betacoronavirus cameli) was detected by nested RT-PCR and HTS in a rectal swab from one Molossus molossus bat in southern Brazil (1/65, 1.5%). 42525174
2026-07-29 Zoonotic Surveillance Viral Detection SARS-CoV-2 RNA was detected in three white-tailed deer in Massachusetts and Vermont. 42655652
2026-07-29 Zoonotic Surveillance Serological Evidence ELISA detected SARS-CoV-2–reactive sera in nine wild animals across Eastern cottontail, Eastern coyote, and raccoon, indicating prior exposure. 42655652
2026-07-29 Genomic Evolution Phylogenetic Evolution Phylogenetic reconstruction of five genomic contigs placed the detected Betacoronavirus cameli within Merbecovirus and showed close relationship to MERS-CoV strains from bats and dromedary camels. 42525174
2026-07-29 Zoonotic Surveillance Serological Evidence Neutralizing antibodies to the SARS-CoV-2 Omicron variant were detected in a single Eastern cottontail. 42655652
2026-07-29 Transmission Evidence Cross-species Transmission Phylogeographic relatedness of Vermont sequences supports a possible human-to–white-tailed deer SARS-CoV-2 spillover. 42655652
2026-07-29 Genomic Evolution Phylogenetic Evolution Vermont white-tailed deer SARS-CoV-2 genomes are closely related to contemporaneous human sequences from the same region, indicating recent human–deer lineage linkage. 42655652
2026-07-21 Functional Mechanism Molecular Adaptation Several Guangdong pangolin coronaviruses carry a lysine substitution at spike residue 519 that confers marked immune evasion by modulating spike conformational state. 42267927
2026-07-21 Functional Mechanism Molecular Adaptation SARS-CoV-2 acquired a divergent immune-evasive mutation at spike residue 519. 42267927
2026-07-15 Experimental Infection Host Range Experiment PDCoV replicated efficiently without exogenous trypsin in human H1299 and Caco-2 cells and murine MC-38 cells, indicating high permissiveness. 42515629
2026-07-15 Experimental Infection Host Range Experiment Human H1299 and Caco-2 and murine MC-38 cells were highly susceptible to PDCoV, whereas MCF-7, TE-10, and KYSE-410 were non-permissive. 42515629
2026-07-15 Experimental Infection Pathogenicity Experiment High concentrations of trypsin triggered prominent syncytia formation in PDCoV-infected H1299, U251, and Neuro-2a cells. 42515629
2026-07-15 Experimental Infection Host Range Experiment Exogenous trypsin enhanced PDCoV replication in semi-permissive cell lines in a concentration-dependent manner. 42515629
2026-07-15 Functional Mechanism Molecular Adaptation Basal APN expression correlates with cellular susceptibility to PDCoV across tested cell lines. 42515629
2026-07 Experimental Infection Host Range Experiment Seasonal influenza A H1N1, H3N2, influenza B, MERS-CoV, and SARS-CoV productively replicated and infected human bronchial tissues in an ex vivo model. 42397692
2026-07 Experimental Infection Pathogenicity Experiment In an in vitro human alveolar model, HPAI H5N1, H7N9, MERS-CoV, and SARS-CoV caused more severe impairment of alveolar fluid clearance than seasonal H1N1, H3N2, and influenza B viruses. 42397692
Evidence-grounded Research Brief · Past month 23

Synthesizing linked evidence and source literature...

Generating an evidence-grounded brief with GPT-5...
6 source articles 10 hosts 0 countries
Publication date Category / type Key finding PMID
2026-10-09 Zoonotic Surveillance Serological Evidence A multiplex immunofluorescence assay was used to screen bat and rodent seroprevalence against 14 RNA viruses across seven families. 42853873
2026-10-05 Functional Mechanism Molecular Adaptation nsp12 mutations I171V, A185S, R249K, and N611S increased replication in a SARS-CoV-2 replicon in human-cell context. 42831623
2026-10-05 Genomic Evolution Phylogenetic Evolution Phylogenetic/comparative analysis of 183 bat SARS-related coronavirus nsp12 sequences identified mutation hotspots overlapping variable sites in human SARS-CoV-2 (including P323L), indicating shared functional constraints across hosts. 42831623
2026-10-05 Experimental Infection Host Range Experiment Specific bat SARS-related coronavirus nsp12 mutations enhanced viral replication in both bat and human cells in controlled assays. 42831623
2026-10-05 Functional Mechanism Molecular Adaptation Eight bat-derived nsp12 mutations increased polymerase activity at 37°C, with several also advantageous at 33°C or 40°C. 42831623
2026-10-05 Functional Mechanism Molecular Adaptation Adaptive nsp12 mutations map to RNA capping and RdRp catalytic core regions without altering remdesivir sensitivity. 42831623
2026-10 Zoonotic Surveillance Serological Evidence Sera from SARS-CoV-2 convalescent individuals robustly cross-neutralised clade 1 sarbecoviruses and showed limited cross-neutralisation across the broader sarbecovirus sub-genus. 42821519
2026-10 Functional Mechanism Receptor Usage Clade 1 sarbecoviruses, including SARS-CoV-2 and the BANAL isolates from Laos, show broad ACE2 usage, whereas clade 3 (RhGB07) and clade 5 (Rc-o319) exhibit restricted ACE2 usage. 42821519
2026-10 Experimental Infection Host Range Experiment Generalist sarbecoviruses maintained broad entry across a diverse mammalian ACE2 panel (human, non-human primate, livestock, rodent, and potential intermediate hosts), whereas specialists like RhGB07 showed more variable phenotypes. 42821519
2026-10 Zoonotic Surveillance Serological Evidence Monoclonal antibodies derived from COVID-19 vaccinees with breakthrough infections identified epitope classes mediating broader neutralisation. 42821519
2026-10 Functional Mechanism Receptor Usage SARS-CoV-2 variants, especially Omicron and its sub-lineages, display an expanding or shifting generalist pattern of ACE2 usage. 42821519
2026-09-24 Experimental Infection Pathogenicity Experiment In K18-hACE2 hamsters, MpCoV-GD caused lung pathology comparable to SARS-CoV-2, with extensive damage to the alveolar parenchyma. 42782103
2026-09-24 Experimental Infection Host Range Experiment Pangolin sarbecoviruses MpCoV-GX and MpCoV-GD replicate in human cells and organoids, though less efficiently than SARS-CoV-2. 42782103
2026-09-24 Experimental Infection Pathogenicity Experiment In K18-hACE2 hamsters, MpCoV-GX produced milder lung disease characterized mainly by alveolar wall thickening due to mild inflammatory cell infiltration. 42782103
2026-09-24 Experimental Infection Experimental Transmission MpCoV-GX transmitted via direct contact and aerosol in hACE2 transgenic hamsters, with infectivity attenuated during aerosol transmission. 42782103
2026-09-24 Functional Mechanism Receptor Usage Spike proteins from pangolin sarbecoviruses mediate cell–cell membrane fusion, with MpCoV-GD fusing more strongly than MpCoV-GX but weaker than SARS-CoV-2. 42782103
2026-09-23 Functional Mechanism Molecular Adaptation Host RBP NONO upregulates the MERS-CoV entry receptor DPP4 via epigenetic regulation, enabling MERS-CoV replication and entry. 42818199
2026-09-23 Functional Mechanism Receptor Usage MERS-CoV uses DPP4 (CD26) as the major cellular receptor required for attachment and entry. 42818199
2026-09-16 Functional Mechanism Receptor Usage Aminopeptidase N (APN) functions as a receptor for hedgehog merbecoviruses. 42749891
2026-09-16 Experimental Infection Host Range Experiment Hedgehog merbecoviruses could not use human aminopeptidase N (APN) and showed restricted use across 30 mammalian APN orthologues in receptor-entry assays. 42749891
2026-09-16 Experimental Infection Host Range Experiment Hedgehog coronavirus spike pseudotypes were more infectious when produced at 33 °C than at 37 °C. 42749891
2026-09-16 Functional Mechanism Receptor Usage Electron cryomicroscopy defined a distinct spike–APN interface for hedgehog merbecoviruses, explaining restricted cross-species receptor usage. 42749891
2026-09-16 Functional Mechanism Receptor Usage APN receptor usage by hedgehog merbecoviruses was validated using VSV-based pseudotype entry and protein binding assays. 42749891
Evidence-grounded Research Brief · Past week 6

Synthesizing linked evidence and source literature...

Generating an evidence-grounded brief with GPT-5...
2 source articles 5 hosts 0 countries
Publication date Category / type Key finding PMID
2026-10-09 Zoonotic Surveillance Serological Evidence A multiplex immunofluorescence assay was used to screen bat and rodent seroprevalence against 14 RNA viruses across seven families. 42853873
2026-10-05 Functional Mechanism Molecular Adaptation nsp12 mutations I171V, A185S, R249K, and N611S increased replication in a SARS-CoV-2 replicon in human-cell context. 42831623
2026-10-05 Genomic Evolution Phylogenetic Evolution Phylogenetic/comparative analysis of 183 bat SARS-related coronavirus nsp12 sequences identified mutation hotspots overlapping variable sites in human SARS-CoV-2 (including P323L), indicating shared functional constraints across hosts. 42831623
2026-10-05 Experimental Infection Host Range Experiment Specific bat SARS-related coronavirus nsp12 mutations enhanced viral replication in both bat and human cells in controlled assays. 42831623
2026-10-05 Functional Mechanism Molecular Adaptation Eight bat-derived nsp12 mutations increased polymerase activity at 37°C, with several also advantageous at 33°C or 40°C. 42831623
2026-10-05 Functional Mechanism Molecular Adaptation Adaptive nsp12 mutations map to RNA capping and RdRp catalytic core regions without altering remdesivir sensitivity. 42831623

Evidence-related Animal

Evidence-related animal composition

303 animal taxa

Geographic evidence

Evidence distribution by country

74 countries

Temporal evidence

Evidence dynamics by year

195 year-type groups

Publication output

Source articles by month

284 months