Complete genome analyses of G4P[6] rotavirus detected in Argentinean children with diarrhoea provides evidence of interspecies transmission from swine.
J I Degiuseppe1
J C Beltramino
A Millán
J A Stupka
G I Parra
Affiliations1 institutions
Instituto Nacional de Enfermedades Infecciosas (ANLIS 'Dr Carlos G. Malbrán'), Buenos Aires, Argentina. [email protected]
Rotaviruses are dynamic pathogens that have been shown to infect multiple species. In 2006, two G4P[6] rotavirus strains with porcine characteristics were detected in Santa Fe, Argentina. To further characterize and determine the origin of these strains, nearly the full length of their genome was sequenced. While most of the genome segments were from porcine origin, the two strains grouped in different phylogenetic clusters in five out of the 11 genes, suggesting two independent interspecies transmission events. This study expands our knowledge of G4 rotavirus and reinforces the use of complete genome analyses as a key tool for diversity and evolution mechanicisms.
Complete genome sequencing and phylogenetic analysis showed that G4P[6] rotavirus strains detected in Argentinean children had predominantly porcine-origin genome segments, forming different phylogenetic clusters indicative of distinct interspecies transmission events from swine.
Nearly the full length of their genome was sequenced. While most of the genome segments were from porcine origin, the two strains grouped in different phylogenetic clusters in five out of the 11 genes, suggesting two independent interspecies transmission events.
Genes or proteins
genome segments
Analysis methods
complete genome sequencing; phylogenetic analysis
Spillover Event1 records
Spillover EventExtraction confidence 0.95
Key finding
Two G4P[6] rotavirus strains of porcine origin were detected in Argentinean children, indicating swine-to-human transmission.
In 2006, two G4P[6] rotavirus strains with porcine characteristics were detected in Santa Fe, Argentina...provides evidence of interspecies transmission from swine.