Since the national vaccination program was implemented with the H5/H7 bivalent vaccine in poultry in September 2017, the prevalence of H7N9 avian influenza viruses (AIVs) has been controlled effectively in China. However, highly pathogenic H7N9 viruses still exist, causing sporadic outbreaks especially in some regions of northern China. During our routine surveillance in poultry in 2020, we isolated two strains of H7N9 subtype AIV from breeder layer farms in northern China. We found that these two chicken-origin H7N9 isolates were both highly pathogenic (HP) with a four-amino-acid (KRTA) insertion and an I326V mutation (H3 numbering) in the cleavage site of HA to make the motif PEVPKRKRTAR↓GLF. Molecular markers associated with antigenic drift and enhanced pathogenicity in mammals and interspecies transmission were detected in both isolates. Remarkably, both strains gained the F102V and N157D mutations in their HA genes, which have never been reported before. Solid-phase direct binding assay showed that these two isolates both had dual-receptor binding characteristics, while thermal and acid stability assays indicated that they were relatively stable in high-temperature or acidic conditions. In addition, the animal experiments demonstrated that both strains were highly pathogenic to chickens but low pathogenic to mice. These results suggested that the evolution of H7N9 subtype AIV is still continuing, and they pose a potential threat to poultry and public health. Thus, attention should be paid to the importance of continual surveillance of the H7N9 AIVs.
Acid stabilityDual-receptor characteristicsH7N9 subtype avian influenza virusHighly pathogenicThermal stabilityInfluenza A Virus, H7N9 SubtypeInfluenza in BirdsAnimalsChickensChinaHemagglutinin Glycoproteins, Influenza VirusMammalsMicePhylogenyPoultry
Structured evidence records
Evidence records
9 total
Molecular Adaptation4 records
Molecular AdaptationExtraction confidence 0.95
Key finding
Chicken-origin H7N9 avian influenza viruses had a KRTA insertion and I326V mutation in HA cleavage site enhancing pathogenicity.
We found that these two chicken-origin H7N9 isolates were both highly pathogenic (HP) with a four-amino-acid (KRTA) insertion and an I326V mutation (H3 numbering) in the cleavage site of HA to make the motif PEVPKRKRTAR↓GLF.
Genes or proteins
HA
Mutations
KRTA insertion; I326V
Mechanism types
pathogenicity
Molecular AdaptationExtraction confidence 0.95
Key finding
Novel HA mutations F102V and N157D were identified in the H7N9 isolates, representing ongoing molecular evolution.
In addition, the animal experiments demonstrated that both strains were highly pathogenic to chickens but low pathogenic to mice.
Method
animal experiment
Experimental system
in vivo animal experiment
Genomic Evolution1 records
Genomic EvolutionExtraction confidence 0.80
Key finding
Genomic and phylogenetic analyses revealed multiple unique HA mutations and insertions in two chicken-derived highly pathogenic H7N9 viruses from northern China, indicating continued viral evolution.
We found that these two chicken-origin H7N9 isolates were both highly pathogenic (HP) with a four-amino-acid (KRTA) insertion and an I326V mutation in the cleavage site of HA to make the motif PEVPKRKRTAR↓GLF... Remarkably, both strains gained the F102V and N157D mutations in their HA genes. MeSH terms include 'Influenza A Virus, H7N9 Subtype / genetics' and 'Phylogeny'.
Genes or proteins
HA; Hemagglutinin Glycoproteins
Analysis methods
genetic analysis; phylogenetic analysis
Receptor Usage1 records
Receptor UsageExtraction confidence 0.90
Key finding
Two chicken-origin H7N9 avian influenza virus isolates displayed dual-receptor binding characteristics in a solid-phase direct binding assay.