Circulation and overwintering of Usutu virus lineages in north-eastern Spain: A one health perspective (2021-2025).

Arjola Leka1,2 Jaume Gardela1,2 Elena Obón3 Maria Pifarré4 Miguel Julián Martínez5,6,7 Jéssica Navero-Castillejos5,7 Ramon Casals8 Alba Solé9 Núria Busquets1,2
Affiliations 9 institutions
  1. IRTA. Programa de Sanitat Animal, Centre de Recerca en Sanitat Animal (CReSA), Campus de la Universitat Autònoma de Barcelona (UAB), Bellaterra, Catalonia, Spain.
  2. Unitat mixta d'Investigació IRTA-UAB en Sanitat Animal, Centre de Recerca en Sanitat Animal (CReSA), Campus de la Universitat Autònoma de Barcelona (UAB), Bellaterra, Catalonia, Spain.
  3. Centre de Fauna de Torreferrussa, Àrea de Gestió Ambiental Servei de Fauna i Flora, Forestal Catalana, Santa Perpètua de Mogoda, 08130, Spain.
  4. Centre de Fauna dels Aiguamolls de l'Empordà, Àrea de Gestió Ambiental Servei de Fauna i Flora, Forestal Catalana, Castelló d'Empúries, 17486, Spain.
  5. Department of Clinical Microbiology, Hospital Clínic, Barcelona, Spain.
  6. Centro de Investigación Biomédica en Red de Enfermedades Infecciosas (CIBERINFEC), Instituto de Salud Carlos III, Madrid, Spain.
  7. Barcelona Institute for Global Health (ISGlobal), Hospital Clinic de Barcelona, Universitat de Barcelona, Barcelona, Spain.
  8. Secretaria de Salut Pública, Departament de Salut, Generalitat de Catalunya, Barcelona, Spain.
  9. Departament d'Agricultura, Ramaderia, Pesca i Alimentació Generalitat de Catalunya, Servei de Sanitat Animal, Barcelona 08007, Spain.

Abstract

Usutu virus (USUV) is a mosquito-borne flavivirus that has expanded widely across Europe. While it has been traditionally considered an animal pathogen, reports of human infections and the detection of USUV in blood donors in Europe (including Spain) have increased the public health awareness of this emerging pathogen. In the last decade, serological evidence of USUV circulation in animals have been reported in Northeastern Spain (Catalonia) where human infections have also been recently detected; however, molecular confirmation of viral circulation in wild birds was still lacking. Our main goal was to investigate USUV circulation in Catalonia (2021-2025) using One Health approach through the West Nile virus surveillance program. Once USUV was detected, we aimed to assess USUV overwintering, genetic diversity and pathology in positive wild birds. From 369 bird samples collected, six blackbirds from the Barcelona province resulted USUV-positive in 2022, 2024, and 2025, showing signs of systemic infection. Additionally, USUV was found in a Culex pipiens mosquito pool, and sentinel and backyard birds showed serological evidence of flavivirus exposure in Girona province. Phylogenetic analyses revealed USUV overwintering, evidence of human spillover and the co-circulation of two distinct lineages, Africa 3 and Europe 2. Notably, Europe 2 was detected for the first time in Spain. These findings prove active enzootic USUV circulation in Northeastern Spain and highlight the need for One Health surveillance to support early USUV detection to reduce the risk of USUV transmission from enzootic cycle.

Supporting text Virus Host Location
Animal health 4 Arbovirus 9 Human health 3 Surveillance 60 Usutu virus 4 Vector-born disease 1 Zoonosis 116

Evidence records

6 total
Zoonotic Surveillance
4 records · 3 evidence types
Evidence type
2 records
OVE10992
Key finding

Usutu virus RNA was molecularly detected in six wild blackbirds collected in Barcelona province during 2022, 2024, and 2025.

Virus
Host
Location
Supporting text

From 369 bird samples collected, six blackbirds from the Barcelona province resulted USUV-positive in 2022, 2024, and 2025, showing signs of systemic infection.

Method
molecular detection
Sample type
bird samples
Geographic raw
Barcelona province
Evidence type
1 records
OVE10994
Key finding

Sentinel and backyard birds from Girona province showed serological evidence of flavivirus exposure.

Virus
Host
Location
Not specified
Supporting text

Sentinel and backyard birds showed serological evidence of flavivirus exposure in Girona province.

Method
serological testing | antibody detection assay
Sample type
serum samples
Evidence type
1 records
OVE10997
Key finding

Active enzootic circulation of Usutu virus was demonstrated in Northeastern Spain involving wild birds and mosquitoes.

Virus
Host
Location
Supporting text

These findings prove active enzootic USUV circulation in Northeastern Spain and highlight the need for One Health surveillance.

Method
molecular detection | phylogenetic analysis | One Health surveillance program
Sample type
wild bird samples | mosquito pool
Geographic raw
Northeastern Spain
Genomic Evolution
2 records · 1 evidence types
Evidence type
2 records
OVE10995
Key finding

Phylogenetic analysis showed co-circulation of two distinct Usutu virus lineages, Africa 3 and Europe 2, and revealed overwintering of the virus in northeastern Spain, with lineage Europe 2 detected there for the first time.

Virus
Host
Not specified
Location
Not specified
Supporting text

Phylogenetic analyses revealed USUV overwintering, evidence of human spillover and the co-circulation of two distinct lineages, Africa 3 and Europe 2. Notably, Europe 2 was detected for the first time in Spain.

Analysis methods
phylogenetic analysis
OVE10996
Key finding

Phylogenetic analyses indicated a natural animal-to-human spillover of Usutu virus in Northeastern Spain.

Virus
Host
Location
Supporting text

Phylogenetic analyses revealed USUV overwintering, evidence of human spillover and the co-circulation of two distinct lineages, Africa 3 and Europe 2.

Analysis methods
phylogenetic analysis