Genetic Diversity, Reassortment Patterns, and Antigenic Characterization of Two H9N2 Avian Influenza Viruses Isolated from Quails in China.

Yutao Teng1 Peidong Li1 Fuyou Zhang1 Wanting Zhou1 Xue Wang1 Hao Zhu1 Qingqing Song1 Zhaoyang Li1 Chunguo Liu1
Affiliations 1 institutions
  1. Group Biological Products R&D Center, Shandong Sinder Technology Co., Ltd., Qingdao 266101, China.
Active Last checked 2026-09-29 03:30:36 Source: NCBI PubMed

Abstract

H9N2 avian influenza viruses pose a persistent zoonotic risk owing to their broad host adaptability. Between 2024 and 2025, two H9N2 isolates (ZHY1022B2 and ZHY0417A11) were recovered from quail flocks in Hebei, China. Phylogenetic analysis clustered their HA genes within the dominant B4.7.2 subclade, but diverged into two subgroups (B4.7.2.2 and B4.7.2.1). Of particular interest was ZHY0417A11, which displayed a multigenic reassortment pattern-its PB1 originated from an H3N8 virus, PA and PB2 from H3N3, NS from H10N3, and the M gene was nearly identical (99.32%) to a human H3N8 isolate, whereas the remaining HA, NA and NP segments maintained the H9N2 backbone. Despite the presence of the HA mammalian-adaptive markers (H191N, A198V and Q234L), both strains showed marked antigenic drift from the vaccine strain SS (BJ/94-like; R < 0.5), while retaining reactivity with currently circulating field strains. These findings argue for heightened vigilance in quail populations, given their role as mixing vessels, and highlight the limitations of current vaccine matching in light of ongoing H9N2 evolution.

Supporting text Virus Host Location
antigenicity 11 avian influenza virus 64 gene reassortment 1 H9N2 subtype 5 quail 10 Antigens, Viral 50 Genetic Variation 131 Influenza A Virus, H9N2 Subtype 75 Influenza in Birds 352 Quail 9 Reassortant Viruses 109 Animals 1981 China 234 Phylogeny 826

Evidence records

4 total
Zoonotic Surveillance
1 records · 1 evidence types
Evidence type
1 records
OVE12060
Key finding

Two H9N2 avian influenza virus isolates (ZHY1022B2 and ZHY0417A11) were recovered from quail flocks in Hebei, China during 2024–2025.

Virus
Host
Natural host
Location
Not specified
Supporting text

Between 2024 and 2025, two H9N2 isolates (ZHY1022B2 and ZHY0417A11) were recovered from quail flocks in Hebei, China.

Functional Mechanism
1 records · 1 evidence types
Evidence type
1 records
OVE12063
Key finding

H9N2 isolates carry HA mammalian-adaptive markers H191N, A198V, and Q234L.

Virus
Host
Not specified
Location
Not specified
Supporting text

Despite the presence of the HA mammalian-adaptive markers (H191N, A198V and Q234L)...

Genes or proteins
HA
Mutations
H191N | A198V | Q234L
Mechanism types
host-range expansion | receptor binding | host entry
Genomic Evolution
2 records · 2 evidence types
Evidence type
1 records
OVE12061
Key finding

H9N2 isolate ZHY0417A11 is a multigenic reassortant acquiring PB1 from H3N8, PA and PB2 from H3N3, NS from H10N3, and retaining an H9N2 HA/NA/NP backbone, with an M gene nearly identical to a human H3N8 isolate.

Virus
Host
Not specified
Location
Not specified
Supporting text

ZHY0417A11 ... displayed a multigenic reassortment pattern-its PB1 originated from an H3N8 virus, PA and PB2 from H3N3, NS from H10N3, and the M gene was nearly identical (99.32%) to a human H3N8 isolate, whereas the remaining HA, NA and NP segments maintained the H9N2 backbone.

Event type
reassortment
Genes or segments
PB1 (from H3N8) | PA (from H3N3) | PB2 (from H3N3) | NS (from H10N3) | M (nearly identical to a human H3N8 isolate) | HA (H9N2 backbone) | NA (H9N2 backbone) | NP (H9N2 backbone)
Evidence type
1 records
OVE12062
Key finding

HA genes of the two H9N2 quail isolates fall within subclade B4.7.2 and segregate into subgroups B4.7.2.2 and B4.7.2.1.

Virus
Host
Natural host
Location
Not specified
Supporting text

Between 2024 and 2025, two H9N2 isolates (ZHY1022B2 and ZHY0417A11) were recovered from quail flocks in Hebei, China. Phylogenetic analysis clustered their HA genes within the dominant B4.7.2 subclade, but diverged into two subgroups (B4.7.2.2 and B4.7.2.1).

Genes or proteins
HA
Analysis methods
Phylogenetic analysis