Genetic Diversity of Clade 2.3.4.4b H5Nx High Pathogenicity Avian Influenza Viruses Detected in Korea During the 2025-2026 Winter Season and Pathogenicity of H5N1 and H5N9 Viruses.

Yunyueng Jang1 Ra Mi Cha1 Min-Ji Park1 Jong-Min Kim1 Eui Hyeon Lim1 Gyeong-Beom Heo1 Se-Hee An1 Bina Lee1 Hyun-Ji Seo1 Kwang-Nyeong Lee1 Youn-Jeong Lee1 Eun-Kyoung Lee2
Affiliations 2 institutions
  1. Avian Influenza Research & Diagnostic Division, Animal and Plant Quarantine Agency, 177 Hyeoksin 8-ro, Gimcheon-si, Gyeongsangbuk-do, 39660, Republic of Korea.
  2. Avian Influenza Research & Diagnostic Division, Animal and Plant Quarantine Agency, 177 Hyeoksin 8-ro, Gimcheon-si, Gyeongsangbuk-do, 39660, Republic of Korea. Electronic address: [email protected].
Active Last checked 2026-09-24 03:30:26 Source: NCBI PubMed

Abstract

Clade 2.3.4.4b H5N1, H5N6, and H5N9 high pathogenicity avian influenza viruses (HPAIVs) were detected in poultry and wild birds during the 2025-2026 winter season in Korea. During this period, 62 H5Nx HPAI outbreaks occurred in poultry, and 63 cases were reported in wild birds. Genome constellation analysis revealed substantial genotype diversity. Most H5N1 and H5N9 genotypes were reassortants containing gene segments derived from East Asian clade 2.3.4.4b H5N1 HPAIVs since 2022 and low-pathogenicity avian influenza viruses from wild birds. Notably, the European H5N1 genotype EA-2024-DI.2.1, which spread rapidly across Europe in 2025, and its reassortants were identified in Korea. The novel poultry genotypes were also detected in wild birds, supporting wild bird to poultry spillover, whereas one genotype detected in previous season was identified in small-scale poultry farms. H5N1 (C588) of major 25G2 genotype in poultry and H5N9 (C722) of N9-G2 genotype showed high infectivity in chickens with 103.3 and 103.2 EID50 of median lethal dose (LD50) values, respectively. The predominance of the 25G2 genotype in poultry may have been influenced by efficient infection and virus introduction into high-density poultry production areas, potentially facilitating horizontal transmission under field conditions. In young ducks, H5N1 caused rapid mortality, whereas H5N9 induced limited clinical signs without mortality. Both viruses were transmitted to all contact ducks, increasing the risk of transmission to poultry. Despite intensified surveillance and early detection efforts to limit virus spread, H5Nx HPAIV outbreaks occurred during the 2025-2026 winter season. These findings highlight the need for continued surveillance, together with rapid genomic and pathogenic characterization of newly introduced viruses.

Supporting text Virus Host Location
clade 2.3.4.4b 21 genotype 149 H5N1 88 H5N6 7 H5N9 1 high pathogenicity avian influenza 4 Korea 4 pathogenicity 61

Evidence records

10 total
Zoonotic Surveillance
4 records · 2 evidence types
Evidence type
3 records
OVE12197
Key finding

Clade 2.3.4.4b H5N1 HPAIV was detected in poultry and wild birds in Korea during the 2025–2026 winter season, with numerous outbreaks and cases reported.

Virus
Host
Location
Supporting text

Clade 2.3.4.4b H5N1, H5N6, and H5N9 high pathogenicity avian influenza viruses (HPAIVs) were detected in poultry and wild birds during the 2025-2026 winter season in Korea. During this period, 62 H5Nx HPAI outbreaks occurred in poultry, and 63 cases were reported in wild birds.

Method
detection
Geographic raw
Korea
Country inferred
KOR
OVE12198
Key finding

Clade 2.3.4.4b H5N6 HPAIV was detected in poultry and wild birds in Korea during the 2025–2026 winter season.

Virus
Host
Location
Supporting text

Clade 2.3.4.4b H5N1, H5N6, and H5N9 high pathogenicity avian influenza viruses (HPAIVs) were detected in poultry and wild birds during the 2025-2026 winter season in Korea.

Method
detection
Geographic raw
Korea
Country inferred
KOR
OVE12199
Key finding

Clade 2.3.4.4b H5N9 HPAIV was detected in poultry and wild birds in Korea during the 2025–2026 winter season.

Virus
Host
Location
Supporting text

Clade 2.3.4.4b H5N1, H5N6, and H5N9 high pathogenicity avian influenza viruses (HPAIVs) were detected in poultry and wild birds during the 2025-2026 winter season in Korea.

Method
detection
Geographic raw
Korea
Country inferred
KOR
Evidence type
1 records
OVE12202
Key finding

H5Nx HPAIV genotypes first identified in poultry were also found in wild birds in Korea, supporting wild bird-to-poultry spillover.

Virus
Host
Location
Supporting text

Clade 2.3.4.4b H5N1, H5N6, and H5N9 high pathogenicity avian influenza viruses (HPAIVs) were detected in poultry and wild birds during the 2025-2026 winter season in Korea. The novel poultry genotypes were also detected in wild birds, supporting wild bird to poultry spillover, whereas one genotype detected in previous season was identified in small-scale poultry farms.

Method
genome constellation analysis | genotypic comparison across host populations | surveillance in poultry and wild birds
Geographic raw
Korea
Country inferred
KOR
Experimental Infection
4 records · 2 evidence types
Evidence type
2 records
OVE12203
Key finding

H5N1 (C588) and H5N9 (C722) were highly lethal to chickens, with LD50 values of 10^3.3 and 10^3.2 EID50, respectively.

Virus
Host
Location
Not specified
Supporting text

H5N1 (C588) of major 25G2 genotype in poultry and H5N9 (C722) of N9-G2 genotype showed high infectivity in chickens with 10^3.3 and 10^3.2 EID50 of median lethal dose (LD50) values, respectively.

Method
median lethal dose (LD50) determination | EID50 quantification
Experimental system
animal model (chickens) experimental infection
OVE12204
Key finding

In young ducks, H5N1 caused rapid mortality while H5N9 produced limited clinical signs without mortality.

Virus
Host
Experimental system
Location
Not specified
Supporting text

In young ducks, H5N1 caused rapid mortality, whereas H5N9 induced limited clinical signs without mortality.

Method
clinical observation of morbidity/mortality
Experimental system
animal model (young ducks) experimental infection
Evidence type
2 records
OVE12205
Key finding

H5N1 transmitted to all contact ducks in a controlled contact-transmission experiment.

Virus
Host
Experimental system
Location
Not specified
Supporting text

In young ducks, H5N1 caused rapid mortality, whereas H5N9 induced limited clinical signs without mortality. Both viruses were transmitted to all contact ducks, increasing the risk of transmission to poultry.

Method
contact exposure of naïve ducks to infected ducks | observation of transmission/infection in contacts
Experimental system
contact transmission model in ducks
OVE12206
Key finding

H5N9 transmitted to all contact ducks in a controlled contact-transmission experiment.

Virus
Host
Experimental system
Location
Not specified
Supporting text

In young ducks, H5N1 caused rapid mortality, whereas H5N9 induced limited clinical signs without mortality. Both viruses were transmitted to all contact ducks, increasing the risk of transmission to poultry.

Method
contact exposure of naïve ducks to infected ducks | observation of transmission/infection in contacts
Experimental system
contact transmission model in ducks
Genomic Evolution
2 records · 2 evidence types
Evidence type
1 records
OVE12200
Key finding

Most H5N1 and H5N9 genotypes detected in Korea in 2025–2026 are reassortants between East Asian clade 2.3.4.4b H5N1 HPAIVs (since 2022) and low-pathogenicity avian influenza viruses from wild birds.

Virus
Host
Not specified
Location
Not specified
Supporting text

Most H5N1 and H5N9 genotypes were reassortants containing gene segments derived from East Asian clade 2.3.4.4b H5N1 HPAIVs since 2022 and low-pathogenicity avian influenza viruses from wild birds.

Event type
reassortment
Evidence type
1 records
OVE12201
Key finding

The European H5N1 genotype EA-2024-DI.2.1 and its reassortants, which spread in Europe in 2025, were identified in Korea based on genomic constellation analysis.

Virus
Host
Not specified
Location
Not specified
Supporting text

Notably, the European H5N1 genotype EA-2024-DI.2.1, which spread rapidly across Europe in 2025, and its reassortants were identified in Korea.

Analysis methods
genome constellation analysis