Receptor and viral determinants of SARS-coronavirus adaptation to human ACE2.

Wenhui Li1 Chengsheng Zhang Jianhua Sui Jens H Kuhn Michael J Moore Shiwen Luo Swee-Kee Wong I-Chueh Huang Keming Xu Natalya Vasilieva Akikazu Murakami Yaqing He Wayne A Marasco Yi Guan Hyeryun Choe Michael Farzan
Affiliations 1 institutions
  1. Department of Microbiology and Molecular Genetics, Harvard Medical School, New England Primate Research Center, Southborough, MA 01772-9102, USA.

Abstract

Human angiotensin-converting enzyme 2 (ACE2) is a functional receptor for SARS coronavirus (SARS-CoV). Here we identify the SARS-CoV spike (S)-protein-binding site on ACE2. We also compare S proteins of SARS-CoV isolated during the 2002-2003 SARS outbreak and during the much less severe 2003-2004 outbreak, and from palm civets, a possible source of SARS-CoV found in humans. All three S proteins bound to and utilized palm-civet ACE2 efficiently, but the latter two S proteins utilized human ACE2 markedly less efficiently than did the S protein obtained during the earlier human outbreak. The lower affinity of these S proteins could be complemented by altering specific residues within the S-protein-binding site of human ACE2 to those of civet ACE2, or by altering S-protein residues 479 and 487 to residues conserved during the 2002-2003 outbreak. Collectively, these data describe molecular interactions important to the adaptation of SARS-CoV to human cells, and provide insight into the severity of the 2002-2003 SARS epidemic.

Supporting text Virus Host Location
Amino Acid Sequence 128 Angiotensin-Converting Enzyme 2 177 Animals 1948 Binding Sites 89 Carboxypeptidases 6 Catalytic Domain 3 Disease Outbreaks 170 Humans 1440 Membrane Glycoproteins 26 Models, Molecular 99 Molecular Sequence Data 160 Peptidyl-Dipeptidase A 57 Protein Binding 193 Protein Structure, Tertiary 29 Rats 73 Recombinant Fusion Proteins 5 Sequence Alignment 51 Severe Acute Respiratory Syndrome 22 Severe acute respiratory syndrome-related coronavirus 78 Spike Glycoprotein, Coronavirus 274 Viral Envelope Proteins 60 Viverridae 12 ACE2 protein, human 87 Ace2 protein, rat 3

Evidence records

2 total
Functional Mechanism
2 records · 2 evidence types
Evidence type
1 records
OVE11387
Key finding

Human angiotensin-converting enzyme 2 (ACE2) functions as the receptor for SARS coronavirus and contains a defined spike-protein-binding site.

Virus
Host
Location
Not specified
Supporting text

Human angiotensin-converting enzyme 2 (ACE2) is a functional receptor for SARS coronavirus (SARS-CoV). Here we identify the SARS-CoV spike (S)-protein-binding site on ACE2.

Method
binding-site identification | receptor-binding assay | spike protein interaction analysis
Receptors
human angiotensin-converting enzyme 2 (ACE2)
Evidence type
1 records
OVE11389
Key finding

Alterations at SARS-CoV S-protein residues 479 and 487 restore efficient usage of human ACE2, showing adaptive amino‑acid changes linked to receptor binding and host specificity.

Virus
Host
Not specified
Location
Not specified
Supporting text

Human angiotensin-converting enzyme 2 (ACE2) is a functional receptor for SARS coronavirus (SARS-CoV). The lower affinity of these S proteins could be complemented by altering specific residues within the S-protein-binding site of human ACE2 to those of civet ACE2, or by altering S-protein residues 479 and 487 to residues conserved during the 2002-2003 outbreak.

Genes or proteins
S protein | ACE2
Receptors
ACE2
Host factors
human ACE2 | civet ACE2
Mutations
S-protein residues 479 | S-protein residues 487
Mechanism types
receptor binding | receptor usage | host-range expansion