Relationships among porcine and human P[6] rotaviruses: evidence that the different human P[6] lineages have originated from multiple interspecies transmission events.

Vito Martella1 Krisztián Bányai Max Ciarlet Miren Iturriza-Gómara Eleonora Lorusso Simona De Grazia Serenella Arista Nicola Decaro Gabriella Elia Alessandra Cavalli Marialaura Corrente Antonio Lavazza Rafael Baselga Canio Buonavoglia
Affiliations 1 institutions
  1. Dipartimento di Sanità e Benessere Animale, Facoltà di Medicina Veterinaria di Bari, S.p. per Casamassima km 3, 70010 Valenzano, Bari, Italy.

Abstract

Porcine rotavirus strains (PoRVs) bearing human-like VP4 P[6] gene alleles were identified. Genetic characterization with either PCR genotyping or sequence analysis allowed to determine the VP7 specificity of the PoRVs as G3, G4, G5 and G9, and the VP6 as genogroup I, that is predictive of a subgroup I specificity. Sequence analysis of the VP8* trypsin-cleavage product of VP4 allowed PoRVs to be characterized further into genetic lineages within the P[6] genotype. Unexpectedly, the strains displayed significantly higher similarity (up to 94.6% and 92.5% at aa and nt level, respectively) to human M37-like P[6] strains (lineage I), serologically classifiable as P2A, or to the atypical Hungarian P[6] human strains (HRVs), designated as lineage V (up to 97.0% aa and 96.1% nt), than to the porcine P[6] strain Gottfried, lineage II (<85.1% aa and 82.2 nt), which is serologically classified as P2B. Interestingly, no P[6] PoRV resembling the original prototype porcine strain, Gottfried, was detected, while Japanase P[6] PoRV clustered with the atypical Japanase G1 human strain AU19. By analysis of the 10th and 11th genome segments, all the strains revealed a NSP4B genogroup (Wa-like) and a NSP5/6 gene of porcine origin. These findings strongly suggest interspecies transmission of rotavirus strains and/or genes, and may indicate the occurrence of at least 3 separate rotavirus transmission events between pigs and humans, providing convincing evidence that evolution of human rotaviruses is tightly intermingled with the evolution of animal rotaviruses.

Supporting text Virus Host Location
Amino Acid Sequence 128 Animals 1948 Evolution, Molecular 176 Gene Expression Regulation, Viral 7 Humans 1440 Molecular Sequence Data 160 Phylogeny 805 Rotavirus 65 Rotavirus Infections 61 Sequence Alignment 51 Sequence Homology, Amino Acid 18 Species Specificity 84 Swine 258 Viral Proteins 152 Zoonoses 397

Evidence records

3 total
Zoonotic Surveillance
1 records · 1 evidence types
Evidence type
1 records
OVE258
Key finding

Porcine rotavirus strains bearing human-like VP4 P[6] gene alleles were identified in pigs.

Virus
Host
Location
Not specified
Supporting text

Porcine rotavirus strains (PoRVs) bearing human-like VP4 P[6] gene alleles were identified. These findings strongly suggest interspecies transmission of rotavirus strains and/or genes, and may indicate the occurrence of at least 3 separate rotavirus transmission events between pigs and humans.

Method
PCR genotyping | sequence analysis
Genomic Evolution
2 records · 1 evidence types
Evidence type
2 records
OVE260
Key finding

Phylogenetic comparisons of porcine and human P[6] rotavirus VP4 sequences revealed distinct genetic lineages, with Japanese P[6] porcine isolates clustering closely with the atypical Japanese human strain AU19, indicating host-associated evolutionary relationships.

Virus
Host
Location
Not specified
Supporting text

Unexpectedly, the strains displayed significantly higher similarity (up to 94.6% and 92.5% at aa and nt level, respectively) to human M37-like P[6] strains ... while Japanase P[6] PoRV clustered with the atypical Japanase G1 human strain AU19.

Genes or proteins
VP4 | VP8*
Analysis methods
sequence comparison | phylogenetic clustering | genetic lineage analysis
OVE259
Key finding

Porcine P[6] rotavirus strains showed high genetic similarity to human P[6] lineages, indicating multiple cross-species transmission events between pigs and humans.

Virus
Host
Location
Not specified
Supporting text

These findings strongly suggest interspecies transmission of rotavirus strains and/or genes, and may indicate the occurrence of at least 3 separate rotavirus transmission events between pigs and humans.

Analysis methods
PCR genotyping | sequence analysis