An avian influenza H5N1 virus that binds to a human-type receptor.

Prasert Auewarakul1 Ornpreya Suptawiwat Alita Kongchanagul Chak Sangma Yasuo Suzuki Kumnuan Ungchusak Suda Louisirirotchanakul Hatairat Lerdsamran Phisanu Pooruk Arunee Thitithanyanont Chakrarat Pittayawonganon Chao-Tan Guo Hiroaki Hiramatsu Wipawee Jampangern Supamit Chunsutthiwat Pilaipan Puthavathana
Affiliations 1 institutions
  1. Department of Microbiology, Faculty of Medicine, Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand. [email protected]

Abstract

Avian influenza viruses preferentially recognize sialosugar chains terminating in sialic acid-alpha2,3-galactose (SAalpha2,3Gal), whereas human influenza viruses preferentially recognize SAalpha2,6Gal. A conversion to SAalpha2,6Gal specificity is believed to be one of the changes required for the introduction of new hemagglutinin (HA) subtypes to the human population, which can lead to pandemics. Avian influenza H5N1 virus is a major threat for the emergence of a pandemic virus. As of 12 June 2007, the virus has been reported in 45 countries, and 312 human cases with 190 deaths have been confirmed. We describe here substitutions at position 129 and 134 identified in a virus isolated from a fatal human case that could change the receptor-binding preference of HA of H5N1 virus from SAalpha2,3Gal to both SAalpha2,3Gal and SAalpha2,6Gal. Molecular modeling demonstrated that the mutation may stabilize SAalpha2,6Gal in its optimal cis conformation in the binding pocket. The mutation was found in approximately half of the viral sequences directly amplified from a respiratory specimen of the patient. Our data confirm the presence of H5N1 virus with the ability to bind to a human-type receptor in this patient and suggest the selection and expansion of the mutant with human-type receptor specificity in the human host environment.

Supporting text Virus Host Location
Models, Molecular 99 Mutation 209 Binding Sites 89 Hemagglutinin Glycoproteins, Influenza Virus 180 Humans 1440 Influenza A Virus, H5N1 Subtype 300 Influenza, Human 286 N-Acetylneuraminic Acid 25 Protein Binding 193 Protein Structure, Tertiary 29 Receptors, Virus 204

Evidence records

3 total
Zoonotic Surveillance
2 records · 2 evidence types
Evidence type
1 records
OVE450
Key finding

An H5N1 virus was successfully isolated from a fatal human case of avian influenza.

Virus
Host
Location
Not specified
Supporting text

We describe here substitutions at position 129 and 134 identified in a virus isolated from a fatal human case...

Sample type
respiratory specimen
Evidence type
1 records
OVE453
Key finding

H5N1 virus sequences were directly detected in a respiratory specimen from a human patient.

Virus
Host
Location
Not specified
Supporting text

The mutation was found in approximately half of the viral sequences directly amplified from a respiratory specimen of the patient. Our data confirm the presence of H5N1 virus with the ability to bind to a human-type receptor in this patient.

Method
viral RNA amplification | sequence analysis
Sample type
respiratory specimen
Functional Mechanism
1 records · 1 evidence types
Evidence type
1 records
OVE451
Key finding

An H5N1 virus isolated from a human case exhibited hemagglutinin capable of binding both avian-type (SAα2,3Gal) and human-type (SAα2,6Gal) sialic acid receptors.

Virus
Host
Location
Not specified
Supporting text

Substitutions at position 129 and 134 identified in a virus isolated from a fatal human case could change the receptor-binding preference of HA of H5N1 virus from SAalpha2,3Gal to both SAalpha2,3Gal and SAalpha2,6Gal.

Method
receptor-binding analysis | molecular modeling
Receptors
SAalpha2,3Gal | SAalpha2,6Gal
Host factors
hemagglutinin (HA)