Comparative analysis reveals the species-specific genetic determinants of ACE2 required for SARS-CoV-2 entry.

Wenlin Ren1 Yunkai Zhu2 Yuyan Wang2 Hongyang Shi3,4 Yin Yu2 Gaowei Hu2 Fei Feng2 Xiaomin Zhao1 Jun Lan5 Jianping Wu6,7 Devin J Kenney8 Florian Douam8 Yimin Tong3 Jin Zhong3 Youhua Xie2 Xinquan Wang5,9 Zhenghong Yuan2 Dongming Zhou10 Rong Zhang2 Qiang Ding1,9
Affiliations 10 institutions
  1. Center for Infectious Disease Research, School of Medicine, Tsinghua University, Beijing, China.
  2. Key Laboratory of Medical Molecular Virology (MOE/NHC/CAMS), School of Basic Medical Sciences, Shanghai Medical College, Biosafety Level 3 Laboratory, Fudan University, Shanghai, China.
  3. CAS Key Laboratory of Molecular Virology and Immunology, Institut Pasteur of Shanghai, Chinese Academy of Sciences, Shanghai, China.
  4. University of Chinese Academy of Sciences, Beijing, China.
  5. School of Life Sciences, Tsinghua University, Beijing, China.
  6. Zhejiang Provincial Laboratory of Life Sciences and Biomedicine, Key Laboratory of Structural Biology of Zhejiang Province, School of Life Sciences, Westlake University, Hangzhou, Zhejiang, China.
  7. Institute of Biology, Westlake Institute for Advanced Study, Hangzhou, Zhejiang, China.
  8. Department of Microbiology, National Emerging Infectious Diseases Laboratories, Boston University School of Medicine, Boston, Massachusetts, United States of America.
  9. Beijing Advanced Innovation Center for Structural Biology, Tsinghua University, Beijing China.
  10. Department of Pathogen Biology, School of Basic Medical Sciences, Tianjin Medical University, Tianjin, China.

Abstract

Coronavirus interaction with its viral receptor is a primary genetic determinant of host range and tissue tropism. SARS-CoV-2 utilizes ACE2 as the receptor to enter host cell in a species-specific manner. We and others have previously shown that ACE2 orthologs from New World monkey, koala and mouse cannot interact with SARS-CoV-2 to mediate viral entry, and this defect can be restored by humanization of the restrictive residues in New World monkey ACE2. To better understand the genetic determinants behind the ability of ACE2 orthologs to support viral entry, we compared koala and mouse ACE2 sequences with that of human and identified the key residues in koala and mouse ACE2 that restrict viral receptor activity. Humanization of these critical residues rendered both koala and mouse ACE2 capable of binding the spike protein and facilitating viral entry. Our study shed more lights into the genetic determinants of ACE2 as the functional receptor of SARS-CoV-2, which facilitates our understanding of viral entry.

Supporting text Virus Host Location
Animals 1948 Base Sequence 52 COVID-19 425 Host Specificity 132 Humans 1440 Mice 253 Peptidyl-Dipeptidase A 57 Phascolarctidae 2 Receptors, Virus 204 SARS-CoV-2 453 Sequence Alignment 51 Spike Glycoprotein, Coronavirus 274 Virus Internalization 100

Evidence records

1 total
Functional Mechanism
1 records · 1 evidence types
Evidence type
1 records
OVE4662
Key finding

SARS-CoV-2 utilizes ACE2 as its receptor for host-cell entry and shows species specificity among ACE2 orthologs from human, New World monkey, koala, and mouse.

Virus
Host
Location
Not specified
Supporting text

SARS-CoV-2 utilizes ACE2 as the receptor to enter host cell in a species-specific manner. We and others have previously shown that ACE2 orthologs from New World monkey, koala and mouse cannot interact with SARS-CoV-2 to mediate viral entry, and this defect can be restored by humanization of the restrictive residues in New World monkey ACE2.

Method
receptor binding assays | pseudovirus or viral entry assays | ACE2 ortholog comparison
Receptors
ACE2