Exposure to diverse sarbecoviruses indicates frequent zoonotic spillover in human communities interacting with wildlife.

Tierra Smiley Evans1 Chee Wah Tan2 Ohnmar Aung3 Sabai Phyu4 Htin Lin5 Lark L Coffey6 Aung Than Toe3 Pyaephyo Aung7 Tin Htun Aung7 Nyein Thu Aung3 Christopher M Weiss6 Kyaw Zin Thant8 Zaw Than Htun5 Suzan Murray9 Linfa Wang2 Christine Kreuder Johnson3 Hlaing Myat Thu10
Affiliations 10 institutions
  1. Epicenter for Disease Dynamics, One Health Institute, School of Veterinary Medicine, University of California, Davis, USA. Electronic address: [email protected].
  2. Duke-National University of Singapore, Singapore.
  3. Epicenter for Disease Dynamics, One Health Institute, School of Veterinary Medicine, University of California, Davis, USA.
  4. Tropical and Infectious Diseases Department, Specialist Hospital Waibargi, University of Medicine (2), Yangon, Myanmar.
  5. Department of Medical Research, Yangon, Myanmar.
  6. Department of Pathology, Microbiology and Immunology Department, University of California, Davis, USA.
  7. Nature Conservation Society Myanmar, Yangon, Myanmar.
  8. Myanmar Academy of Medical Science, Yangon, Myanmar.
  9. Global Health Program, Smithsonian Institution, Washington, USA.
  10. Department of Medical Research, Yangon, Myanmar. Electronic address: [email protected].

Abstract

Sarbecoviruses are a subgenus of Coronaviridae that mostly infect bats with known potential to infect humans (SARS-CoV and SARS-CoV-2). Populations in Southeast Asia, where these viruses are most likely to emerge, have been undersurveyed to date. We surveyed communities engaged in extractive industries and bat guano harvesting from rural areas in Myanmar. Participants were screened for exposure to sarbecoviruses, and their interactions with wildlife were evaluated to determine the factors associated with exposure to sarbecoviruses. Of 693 people screened between July 2017 and February 2020, 12.1% were seropositive for sarbecoviruses. Individuals were significantly more likely to have been exposed to sarbecoviruses if their main livelihood involved working in extractive industries (logging, hunting, or harvesting of forest products; odds ratio [OR] = 2.71, P = 0.019) or had been hunting/slaughtering bats (OR = 6.09, P = 0.020). Exposure to a range of bat and pangolin sarbecoviruses was identified. Exposure to diverse sarbecoviruses among high-risk human communities provides epidemiologic and immunologic evidence that zoonotic spillover is occurring. These findings inform risk mitigation efforts needed to decrease disease transmission at the bat-human interface, as well as future surveillance efforts warranted to monitor isolated populations for viruses with pandemic potential.

Supporting text Virus Host Location
Bat 54 Coronavirus 195 Myanmar 2 Sarbecovirus 19 SARS-CoV-2 550 Zoonotic 23 Chiroptera 371 COVID-19 425 Severe acute respiratory syndrome-related coronavirus 78 Animals 1948 Animals, Wild 187 Humans 1440 Phylogeny 805 SARS-CoV-2 453 Zoonoses 397

Evidence records

3 total
Zoonotic Surveillance
3 records · 2 evidence types
Evidence type
2 records
OVE6806
Key finding

A serological survey in Myanmar found that 12.1% of 693 people were seropositive for sarbecoviruses, indicating prior exposure among human participants.

Virus
Host
Location
Not specified
Supporting text

Participants were screened for exposure to sarbecoviruses, and their interactions with wildlife were evaluated to determine the factors associated with exposure to sarbecoviruses. Of 693 people screened between July 2017 and February 2020, 12.1% were seropositive for sarbecoviruses.

Method
serological screening
Sample type
serum samples
OVE6807
Key finding

Exposure to bat and pangolin sarbecoviruses among human communities in Myanmar provides epidemiologic evidence of ongoing animal-to-human spillover.

Virus
Host
Location
Supporting text

We surveyed communities engaged in extractive industries and bat guano harvesting from rural areas in Myanmar. Exposure to a range of bat and pangolin sarbecoviruses was identified.

Method
serological screening | epidemiologic analysis
Evidence type
1 records
OVE6808
Key finding

Human exposure to sarbecoviruses in Myanmar was significantly associated with livelihoods involving bat hunting and guano harvesting, indicating an ecological interface at the bat-human boundary where these viruses circulate.

Virus
Host
Location
Supporting text

We surveyed communities engaged in extractive industries and bat guano harvesting from rural areas in Myanmar. Individuals were significantly more likely to have been exposed to sarbecoviruses if their main livelihood involved working in extractive industries (logging, hunting, or harvesting of forest products; odds ratio [OR] = 2.71, P = 0.019) or had been hunting/slaughtering bats (OR = 6.09, P = 0.020).

Method
serological screening | epidemiologic association analysis
Sample type
human serum samples
Geographic raw
Myanmar
Country inferred
MMR