A single amino acid in the PB2 gene of influenza A virus is a determinant of host range.

E K Subbarao1 W London B R Murphy
Affiliations 1 institutions
  1. Respiratory Viruses Section, National Institute of Allergy and Infectious Diseases, Bethesda, Maryland 20892.

Abstract

The single gene reassortant virus that derives its PB2 gene from the avian influenza A/Mallard/NY/78 virus and remaining genes from the human influenza A/Los Angeles/2/87 virus exhibits a host range restriction (hr) phenotype characterized by efficient replication in avian tissue and failure to produce plaques in mammalian Madin-Darby canine kidney cells. The hr phenotype is associated with restriction of viral replication in the respiratory tract of squirrel monkeys and humans. To identify the genetic basis of the hr phenotype, we isolated four phenotypic hr mutant viruses that acquired the ability to replicate efficiently in mammalian tissue. Segregational analysis indicated that the loss of the hr phenotype was due to a mutation in the PB2 gene itself. The nucleotide sequences of the PB2 gene of each of the four hr mutants revealed that a single amino acid substitution at position 627 (Glu-->Lys) was responsible for the restoration of the ability of the PB2 single gene reassortant to replicate in Madin-Darby canine kidney cells. Interestingly, the amino acid at position 627 in every avian influenza A virus PB2 protein analyzed to date is glutamic acid, and in every human influenza A virus PB2 protein, it is lysine. Thus, the amino acid at residue 627 of PB2 is an important determinant of host range of influenza A viruses.

Supporting text Virus Host Location
Virus Replication 191 Amino Acid Sequence 128 Animals 1948 Base Sequence 52 Birds 212 Cloning, Molecular 16 Dogs 176 Genes, Viral 37 Humans 1440 Influenza A virus 186 Molecular Sequence Data 160 Saimiri 1 Viral Structural Proteins 5

Evidence records

3 total
Experimental Infection
1 records · 1 evidence types
Evidence type
1 records
OVE11426
Key finding

The host range–restricted influenza A virus showed limited replication in the respiratory tract of squirrel monkeys and humans.

Virus
Host
Location
Not specified
Supporting text

The hr phenotype is associated with restriction of viral replication in the respiratory tract of squirrel monkeys and humans.

Method
experimental infection | replication analysis in respiratory tissue
Sample type
respiratory tract
Experimental system
animal challenge model and human host system
Functional Mechanism
1 records · 1 evidence types
Evidence type
1 records
OVE11427
Key finding

A single amino acid substitution E627K in PB2 of influenza A virus restores replication in Madin-Darby canine kidney cells, showing residue 627 determines host range adaptation.

Virus
Host
Not specified
Location
Not specified
Supporting text

Interestingly, the amino acid at position 627 in every avian influenza A virus PB2 protein analyzed to date is glutamic acid, and in every human influenza A virus PB2 protein, it is lysine. Thus, the amino acid at residue 627 of PB2 is an important determinant of host range of influenza A viruses.

Genes or proteins
PB2
Mutations
E627K | Glu→Lys at position 627
Mechanism types
host-range expansion | replication adaptation
Genomic Evolution
1 records · 1 evidence types
Evidence type
1 records
OVE11428
Key finding

Comparative sequence analysis of the PB2 gene shows that all avian influenza A viruses carry Glu at PB2 position 627 while all human influenza A viruses carry Lys, indicating host-associated evolutionary differentiation.

Virus
Host
Location
Not specified
Supporting text

Interestingly, the amino acid at position 627 in every avian influenza A virus PB2 protein analyzed to date is glutamic acid, and in every human influenza A virus PB2 protein, it is lysine.

Genes or proteins
PB2
Analysis methods
comparative sequence analysis