Identification of GRP78 as a novel host factor that facilitates zoonotic porcine deltacoronavirus internalization and replication via clathrin-mediated endocytosis.

Xinrong Zhou1,2,3 Konstantin I Ivanov4,5 Xinna Ge1,2 Xin Guo1,2 Jun Han1,2 Yanhong Chen1,2 Lei Zhou1,2 Yongning Zhang1,2 Deyin Guo4 Hanchun Yang1,2
Affiliations 5 institutions
  1. National Key Laboratory of Veterinary Public Health Safety, China Agricultural University, College of Veterinary Medicine, Beijing, People's Republic of China.
  2. Key Laboratory of Animal Epidemiology of Ministry of Agriculture and Rural Affairs, China Agricultural University, College of Veterinary Medicine, Beijing, People's Republic of China.
  3. State Key Laboratory of Respiratory Diseases, Guangzhou Medical University, Guangzhou, People's Republic of China.
  4. Guangzhou National Laboratory, Guangzhou International Bio-Island, Guangzhou, People's Republic of China.
  5. Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.

Abstract

Porcine deltacoronavirus (PDCoV) infects a wide range of hosts and can spread across species. Moreover, it is capable of infecting pAPN-knockout cell lines and pigs, suggesting that other important host factors facilitate PDCoV infection. To identify these important host factors, in this study, we employed co-immunoprecipitation (Co-IP) combined with liquid chromatography-tandem mass spectrometry (LC-MS/MS) to identify 19 significantly upregulated host membrane proteins that interact with the PDCoV S1 protein. Among these, glucose-regulated protein 78 (GRP78) was found to positively regulate PDCoV attachment and internalization, as validated by knockdown, blocking, and overexpression assays. Affinity assays confirmed a strong interaction between GRP78 protein and PDCoV S1 protein. This regulatory function of GRP78 operates in a pAPN-independent way. Mechanistically, we demonstrated that GRP78 interacts with the PDCoV S1 protein via its substrate-binding domain (SBD) and facilitates viral entry through clathrin-mediated endocytosis. Notably, the role of GRP78 in promoting viral entry and replication has also been applied by other coronaviruses, underscoring its potential as a conserved host factor in coronavirus infection. Together, these findings reveal a novel mechanism of PDCoV-host interaction that centers on GRP78-mediated viral attachment and internalization via clathrin-dependent endocytosis.IMPORTANCEPorcine deltacoronavirus (PDCoV) represents a significant zoonotic threat with pandemic potential, exhibiting a broad tissue tropism that underscores its capacity for cross-species spread. Current understanding of PDCoV entry mechanisms, however, remains largely limited to the porcine aminopeptidase N (pAPN), whose knockout fails to fully block infection-highlighting the critical need to identify alternative host entry factors. In this study, we identified the cell membrane protein GRP78 as a novel host factor that binds the C-terminal domain (CTD) of the PDCoV S1 protein via its substrate-binding domain (SBD), thereby mediating viral adsorption and internalization. Furthermore, GRP78 engages clathrin to facilitate viral internalization through endocytosis. Notably, GRP78-mediated entry operates independently of pAPN and demonstrates a degree of broad-spectrum activity relevant to other coronaviruses. Collectively, these findings provide new insights into the early entry mechanisms of PDCoV and identify GRP78 as a potential broad-spectrum target for antiviral intervention.

Supporting text Virus Host Location
clathrin-mediated endocytosis 1 glucose-regulated protein 78 (GRP78) 1 host factor 1 porcine deltacoronavirus 8 viral entry 9

Evidence records

4 total
Experimental Infection
1 records · 1 evidence types
Evidence type
1 records
OVE11826
Key finding

Porcine deltacoronavirus (PDCoV) can infect pAPN-knockout cell lines and pigs, indicating susceptibility even without pAPN.

Virus
Host
Experimental system
Location
Not specified
Supporting text

Moreover, it is capable of infecting pAPN-knockout cell lines and pigs, suggesting that other important host factors facilitate PDCoV infection.

Method
infection of pAPN-knockout cell lines | experimental infection of pigs
Experimental system
cell-culture system and animal challenge model
Functional Mechanism
3 records · 1 evidence types
Evidence type
3 records
OVE11823
Key finding

GRP78 binds the PDCoV S1 protein and promotes PDCoV attachment and internalization independent of pAPN.

Virus
Host
Not specified
Location
Not specified
Supporting text

Among these, glucose-regulated protein 78 (GRP78) was found to positively regulate PDCoV attachment and internalization, as validated by knockdown, blocking, and overexpression assays. Affinity assays confirmed a strong interaction between GRP78 protein and PDCoV S1 protein. This regulatory function of GRP78 operates in a pAPN-independent way.

Method
knockdown | blocking assay | overexpression assay | affinity assay | co-immunoprecipitation (Co-IP) | LC-MS/MS
Receptors
GRP78
Host factors
pAPN
OVE11824
Key finding

GRP78 binds the C-terminal domain of the PDCoV S1 protein via its substrate-binding domain.

Virus
Host
Not specified
Location
Not specified
Supporting text

we identified the cell membrane protein GRP78 as a novel host factor that binds the C-terminal domain (CTD) of the PDCoV S1 protein via its substrate-binding domain (SBD)

Method
binding assay | domain-mapping
Receptors
GRP78
OVE11825
Key finding

GRP78 facilitates PDCoV entry through clathrin-mediated endocytosis.

Virus
Host
Not specified
Location
Not specified
Supporting text

Mechanistically, we demonstrated that GRP78 interacts with the PDCoV S1 protein via its substrate-binding domain (SBD) and facilitates viral entry through clathrin-mediated endocytosis.

Method
endocytosis inhibition/assay | binding assay | mechanistic assay
Receptors
GRP78
Host factors
clathrin