Host species restriction of Middle East respiratory syndrome coronavirus through its receptor, dipeptidyl peptidase 4.

Neeltje van Doremalen1 Kerri L Miazgowicz1 Shauna Milne-Price1 Trenton Bushmaker1 Shelly Robertson1 Dana Scott2 Joerg Kinne3 Jason S McLellan4 Jiang Zhu5 Vincent J Munster6
Affiliations 6 institutions
  1. Laboratory of Virology, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, Montana, USA.
  2. Rocky Mountain Veterinary Branch, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, Montana, USA.
  3. Central Veterinary Research Laboratories, Dubai, Dubai, United Arab Emirates.
  4. Department of Biochemistry, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire, USA.
  5. Department of Immunology and Microbial Science and Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, USA.
  6. Laboratory of Virology, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, Montana, USA [email protected].

Abstract

Middle East respiratory syndrome coronavirus (MERS-CoV) emerged in 2012. Recently, the MERS-CoV receptor dipeptidyl peptidase 4 (DPP4) was identified and the specific interaction of the receptor-binding domain (RBD) of MERS-CoV spike protein and DPP4 was determined by crystallography. Animal studies identified rhesus macaques but not hamsters, ferrets, or mice to be susceptible for MERS-CoV. Here, we investigated the role of DPP4 in this observed species tropism. Cell lines of human and nonhuman primate origin were permissive of MERS-CoV, whereas hamster, ferret, or mouse cell lines were not, despite the presence of DPP4. Expression of human DPP4 in nonsusceptible BHK and ferret cells enabled MERS-CoV replication, whereas expression of hamster or ferret DPP4 did not. Modeling the binding energies of MERS-CoV spike protein RBD to DPP4 of human (susceptible) or hamster (nonsusceptible) identified five amino acid residues involved in the DPP4-RBD interaction. Expression of hamster DPP4 containing the five human DPP4 amino acids rendered BHK cells susceptible to MERS-CoV, whereas expression of human DPP4 containing the five hamster DPP4 amino acids did not. Using the same approach, the potential of MERS-CoV to utilize the DPP4s of common Middle Eastern livestock was investigated. Modeling of the DPP4 and MERS-CoV RBD interaction predicted the ability of MERS-CoV to bind the DPP4s of camel, goat, cow, and sheep. Expression of the DPP4s of these species on BHK cells supported MERS-CoV replication. This suggests, together with the abundant DPP4 presence in the respiratory tract, that these species might be able to function as a MERS-CoV intermediate reservoir. The ongoing outbreak of Middle East respiratory syndrome coronavirus (MERS-CoV) has caused 701 laboratory-confirmed cases to date, with 249 fatalities. Although bats and dromedary camels have been identified as potential MERS-CoV hosts, the virus has so far not been isolated from any species other than humans. The inability of MERS-CoV to infect commonly used animal models, such as hamster, mice, and ferrets, indicates the presence of a species barrier. We show that the MERS-CoV receptor DPP4 plays a pivotal role in the observed species tropism of MERS-CoV and subsequently identified the amino acids in DPP4 responsible for this restriction. Using a combined modeling and experimental approach, we predict that, based on the ability of MERS-CoV to utilize the DPP4 of common Middle East livestock species, such as camels, goats, sheep, and cows, these form a potential MERS-CoV intermediate host reservoir species.

Supporting text Virus Host Location
Host Specificity 132 Animals 1948 Camelus 39 Cattle 126 Cell Line 158 Cell Line, Tumor 12 Coronavirus 92 Cricetinae 41 Dipeptidyl Peptidase 4 32 Ferrets 79 Goats 24 Humans 1440 Livestock 20 Macaca mulatta 10 Mice 253 Mice, Inbred C57BL 21 Middle East 7 Primates 28 Protein Binding 193 Receptors, Coronavirus 6 Receptors, Virus 204 Respiratory Syncytial Viruses 1 Sheep 34 Vero Cells 55

Evidence records

5 total
Zoonotic Surveillance
1 records · 1 evidence types
Evidence type
1 records
OVE1740
Key finding

MERS-CoV was predicted to utilize the DPP4 receptors of camels, goats, sheep, and cows, suggesting these livestock could function as intermediate reservoir species.

Virus
Host
Location
Not specified
Supporting text

Modeling of the DPP4 and MERS-CoV RBD interaction predicted the ability of MERS-CoV to bind the DPP4s of camel, goat, cow, and sheep. Expression of the DPP4s of these species on BHK cells supported MERS-CoV replication. This suggests, together with the abundant DPP4 presence in the respiratory tract, that these species might be able to function as a MERS-CoV intermediate reservoir.

Method
receptor modeling | cell transfection | virus replication assay
Sample type
respiratory tract | BHK cells expressing DPP4
Experimental Infection
2 records · 1 evidence types
Evidence type
2 records
OVE1736
Key finding

Rhesus macaques were experimentally shown to be susceptible to MERS-CoV infection, whereas hamsters, ferrets, and mice were not.

Virus
Host
Location
Not specified
Supporting text

Animal studies identified rhesus macaques but not hamsters, ferrets, or mice to be susceptible for MERS-CoV.

Method
experimental infection | viral replication assessment | pathology observation
Sample type
animal model infection study tissues or respiratory samples
Experimental system
animal challenge model
OVE1737
Key finding

Cell lines of human and nonhuman primate origin were permissive for MERS-CoV replication, while hamster, ferret, and mouse cell lines were not despite the presence of DPP4.

Virus
Host
Location
Not specified
Supporting text

Cell lines of human and nonhuman primate origin were permissive of MERS-CoV, whereas hamster, ferret, or mouse cell lines were not, despite the presence of DPP4.

Method
cell-culture infection | viral replication assay | receptor analysis
Sample type
cell lines
Experimental system
cell-culture infection system
Functional Mechanism
2 records · 1 evidence types
Evidence type
2 records
OVE1734
Key finding

The receptor-binding domain of the MERS-CoV spike protein specifically interacts with dipeptidyl peptidase 4 (DPP4), confirmed by crystallographic structure determination.

Virus
Host
Location
Not specified
Supporting text

Recently, the MERS-CoV receptor dipeptidyl peptidase 4 (DPP4) was identified and the specific interaction of the receptor-binding domain (RBD) of MERS-CoV spike protein and DPP4 was determined by crystallography.

Method
crystallography
Receptors
dipeptidyl peptidase 4 (DPP4)
Host factors
spike protein receptor-binding domain (RBD)
OVE1735
Key finding

Modeling and expression assays showed that MERS-CoV can utilize the dipeptidyl peptidase 4 (DPP4) receptors of camel, goat, cow, and sheep to support viral entry and replication.

Virus
Host
Location
Not specified
Supporting text

Modeling of the DPP4 and MERS-CoV RBD interaction predicted the ability of MERS-CoV to bind the DPP4s of camel, goat, cow, and sheep. Expression of the DPP4s of these species on BHK cells supported MERS-CoV replication.

Method
molecular modeling | heterologous receptor expression | viral replication assay
Receptors
dipeptidyl peptidase 4 (DPP4)
Host factors
receptor-binding domain (RBD)