Unique Structural Features of Influenza Virus H15 Hemagglutinin.

Netanel Tzarum1 Ryan McBride2 Corwin M Nycholat2 Wenjie Peng2,3 James C Paulson4,3 Ian A Wilson5,6
Affiliations 6 institutions
  1. Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, USA.
  2. Department of Molecular Medicine, The Scripps Research Institute, La Jolla, California, USA.
  3. Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California, USA.
  4. Department of Molecular Medicine, The Scripps Research Institute, La Jolla, California, USA [email protected] [email protected].
  5. Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, USA [email protected] [email protected].
  6. Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California, USA.

Abstract

Influenza A H15 viruses are members of a subgroup (H7-H10-H15) of group 2 hemagglutinin (HA) subtypes that include H7N9 and H10N8 viruses that were isolated from humans during 2013. The isolation of avian H15 viruses is, however, quite rare and, until recently, geographically restricted to wild shorebirds and waterfowl in Australia. The HAs of H15 viruses contain an insertion in the 150-loop (loop beginning at position 150) of the receptor-binding site common to this subgroup and a unique insertion in the 260-loop compared to any other subtype. Here, we show that the H15 HA has a high preference for avian receptor analogs by glycan array analyses. The H15 HA crystal structure reveals that it is structurally closest to H7N9 HA, but the head domain of the H15 trimer is wider than all other HAs due to a tilt and opening of the HA1 subunits of the head domain. The extended 150-loop of the H15 HA retains the conserved conformation as in H7 and H10 HAs. Furthermore, the elongated 260-loop increases the exposed HA surface and can contribute to antigenic variation in H15 HAs. Since avian-origin H15 HA viruses have been shown to cause enhanced disease in mammalian models, further characterization and immune surveillance of H15 viruses are warranted.IMPORTANCE In the last 2 decades, an apparent increase has been reported for cases of human infection by emerging avian influenza A virus subtypes, including H7N9 and H10N8 viruses isolated during 2013. H15 is the other member of the subgroup of influenza A virus group 2 hemagglutinins (HAs) that also include H7 and H10. H15 viruses have been restricted to Australia, but recent isolation of H15 viruses in western Siberia suggests that they could be spread more globally via the avian flyways that converge and emanate from this region. Here we report on characterization of the three-dimensional structure and receptor specificity of the H15 hemagglutinin, revealing distinct features and specificities that can aid in global surveillance of such viruses for potential spread and emerging threat to the human population.

Supporting text Virus Host Location
glycan arrays 1 H15 subtype 1 influenza virus 29 receptor binding 30 X-ray crystallography 5 Animals 1948 Australia 28 Binding Sites 89 Birds 212 Crystallography, X-Ray 32 Hemagglutinin Glycoproteins, Influenza Virus 180 Humans 1440 Influenza A virus 186 Influenza A Virus, H7N9 Subtype 87 Influenza, Human 286 Models, Molecular 99 Polysaccharides 31 Protein Binding 193 Protein Conformation 44 Receptors, Virus 204 Siberia 2

Evidence records

2 total
Zoonotic Surveillance
1 records · 1 evidence types
Evidence type
1 records
OVE2593
Key finding

Avian H15 influenza viruses were detected in wild shorebirds and waterfowl in Australia and recently in western Siberia.

Virus
Host
Location
Supporting text

The isolation of avian H15 viruses is, however, quite rare and, until recently, geographically restricted to wild shorebirds and waterfowl in Australia... recent isolation of H15 viruses in western Siberia suggests they could be spread more globally.

Method
virus isolation
Geographic raw
Australia | western Siberia
Country inferred
AUS | RUS
Functional Mechanism
1 records · 1 evidence types
Evidence type
1 records
OVE2590
Key finding

Influenza A H15 hemagglutinin exhibits a high binding preference for avian-type sialic acid receptor analogs based on glycan array analyses.

Virus
Host
Location
Not specified
Supporting text

Here, we show that the H15 HA has a high preference for avian receptor analogs by glycan array analyses.

Method
glycan array analysis
Receptors
avian receptor analogs