Literature detail

Spillover of highly pathogenic avian influenza H5N1 virus to dairy cattle.

Leonardo C Caserta1 Elisha A Frye1 Salman L Butt1 Melissa Laverack1 Mohammed Nooruzzaman1 Lina M Covaleda1 Alexis C Thompson2 Melanie Prarat Koscielny3 Brittany Cronk1 Ashley Johnson3 Katie Kleinhenz2 Erin E Edwards4 Gabriel Gomez4 Gavin Hitchener1 Mathias Martins4 Darrell R Kapczynski5 David L Suarez5 Ellen Ruth Alexander Morris4 Terry Hensley4 John S Beeby1 Manigandan Lejeune1 Amy K Swinford4 François Elvinger1 Kiril M Dimitrov6 Diego G Diel7
Affiliations 7 institutions
  1. Department of Population Medicine and Diagnostic Sciences, Animal Health Diagnostic Center, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA.
  2. Texas A&M Veterinary Medical Diagnostic Laboratory, Canyon, TX, USA.
  3. Ohio Animal Disease and Diagnostic Laboratory, Ohio Department of Agriculture, Reynoldsburg, OH, USA.
  4. Texas A&M Veterinary Medical Diagnostic Laboratory, College Station, TX, USA.
  5. Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, Agricultural Research Service, United States Department of Agriculture, Athens, GA, USA.
  6. Texas A&M Veterinary Medical Diagnostic Laboratory, College Station, TX, USA. [email protected].
  7. Department of Population Medicine and Diagnostic Sciences, Animal Health Diagnostic Center, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA. [email protected].
PMID 39053575 2024 Nature eng ppublish
PubMed DOI Browse context

Article

Publication summary

The highly pathogenic avian influenza (HPAI) H5N1 virus clade 2.3.4.4b has caused the death of millions of domestic birds and thousands of wild birds in the USA since January 2022 (refs. <sup>1-4</sup>). Throughout this outbreak, spillovers to mammals have been frequently documented<sup>5-12</sup>. Here we report spillover of the HPAI H5N1 virus to dairy cattle across several states in the USA. The affected cows displayed clinical signs encompassing decreased feed intake, altered faecal consistency, respiratory distress and decreased milk production with abnormal milk. Infectious virus and viral RNA were consistently detected in milk from affected cows. Viral distribution in tissues via immunohistochemistry and in situ hybridization revealed a distinct tropism of the virus for the epithelial cells lining the alveoli of the mammary gland in cows. Whole viral genome sequences recovered from dairy cows, birds, domestic cats and a raccoon from affected farms indicated multidirectional interspecies transmissions. Epidemiological and genomic data revealed efficient cow-to-cow transmission after apparently healthy cows from an affected farm were transported to a premise in a different state. These results demonstrate the transmission of the HPAI H5N1 clade 2.3.4.4b virus at a non-traditional interface, underscoring the ability of the virus to cross species barriers.

Cattle Diseases Dairying Host Specificity Influenza A Virus, H5N1 Subtype Orthomyxoviridae Infections Animals Birds Cats Cattle Disease Outbreaks Farms Female Genome, Viral Immunohistochemistry In Situ Hybridization Influenza in Birds Mammary Glands, Animal Milk

Structured evidence records

Evidence records

6 total
3 records
Extraction confidence 0.95
Key finding

Highly pathogenic avian influenza H5N1 clade 2.3.4.4b virus was transmitted among bird, cow, cat, and raccoon hosts, demonstrating multidirectional animal-to-animal cross-species transmissions.

Virus
Location
Supporting text

Whole viral genome sequences recovered from dairy cows, birds, domestic cats and a raccoon from affected farms indicated multidirectional interspecies transmissions.

Method
whole viral genome sequencing
Study design
phylogenetic analysis
Transmission direction
animal-to-animal
Geographic raw
United States
Country inferred
United States
Extraction confidence 0.90
Key finding

Highly pathogenic avian influenza H5N1 virus was transmitted between cows and domestic cats on affected farms, indicating mammal-to-mammal cross-species transmission.

Virus
Location
Supporting text

Whole viral genome sequences recovered from dairy cows, birds, domestic cats and a raccoon from affected farms indicated multidirectional interspecies transmissions.

Method
whole viral genome sequencing
Study design
phylogenetic analysis
Transmission direction
animal-to-animal
Geographic raw
United States
Country inferred
United States
Extraction confidence 0.90
Key finding

Highly pathogenic avian influenza H5N1 virus was transmitted between cows and a raccoon, demonstrating another mammal-to-mammal cross-species transmission event.

Virus
Location
Supporting text

Whole viral genome sequences recovered from dairy cows, birds, domestic cats and a raccoon from affected farms indicated multidirectional interspecies transmissions.

Method
whole viral genome sequencing
Study design
phylogenetic analysis
Transmission direction
animal-to-animal
Geographic raw
United States
Country inferred
United States
1 records
Extraction confidence 0.85
Key finding

Whole genome sequencing showed that HPAI H5N1 clade 2.3.4.4b viruses from cattle, birds, cats, and a raccoon were closely related, supporting multidirectional cross-species transmission.

Virus
Host
Location
Not specified
Supporting text

Whole viral genome sequences recovered from dairy cows, birds, domestic cats and a raccoon from affected farms indicated multidirectional interspecies transmissions.

Genes or proteins
whole genome
Analysis methods
whole genome sequencing; genomic analysis
1 records
Extraction confidence 0.95
Key finding

HPAI H5N1 virus spilled over to dairy cattle, causing clinical disease and milk contamination.

Virus
Location
Supporting text

Here we report spillover of the HPAI H5N1 virus to dairy cattle across several states in the USA. The affected cows displayed clinical signs encompassing decreased feed intake, altered faecal consistency, respiratory distress and decreased milk production with abnormal milk.

Method
immunohistochemistry; in situ hybridization; whole viral genome sequencing; epidemiological analysis
Transmission direction
animal-to-animal
Geographic raw
USA
Country inferred
United States
Outbreak setting
farms
Outbreak time
since January 2022
1 records
Extraction confidence 0.98
Key finding

Highly pathogenic avian influenza H5N1 virus spilled over from birds to dairy cattle in the United States.

Virus
Location
Supporting text

Here we report spillover of the HPAI H5N1 virus to dairy cattle across several states in the USA.

Method
sequencing; immunohistochemistry; in situ hybridization
Study design
outbreak investigation
Transmission direction
unknown
Geographic raw
USA
Country inferred
United States