|
-
|
CDC Reports Fourth Human Case of H5 Bird Flu Tied to Dairy Cow Outbreak, (2024) |
CDC |
2024 |
|
PMID 39207932
|
Cluster of Influenza A(H5) Cases Associated with Poultry Exposure at Two Facilities — Colorado, July 2024, (2024) |
CDC |
2024 |
|
-
|
H5 Bird Flu: Current Situation, (2024) |
CDC. H5 Bird Flu: Current Situation |
2024 |
|
-
|
CDC Confirms Human H5 Bird Flu Case in Missouri, (2024) |
CDC |
2024 |
|
PMID 38700506
|
Highly Pathogenic Avian Influenza A(H5N1) Virus Infection in a Dairy Farm Worker |
Uyeki TM et al |
2024 |
|
-
|
HPAI Confirmed Cases in Livestock, (2024) |
USDA |
2024 |
|
PMID 38977017
In OmniVira
|
Pathogenicity and transmissibility of bovine H5N1 influenza virus. |
Eisfeld |
2024 |
|
PMID 38785313
|
Cow’s Milk Containing Avian Influenza A(H5N1) Virus - Heat Inactivation and Infectivity in Mice |
Guan L et al |
2024 |
|
-
|
Detections of Highly Pathogenic Avian Influenza in Mammals, (2024) |
USDA |
2024 |
|
-
|
Confirmations of Highly Pathogenic Avian Influenza in Commercial and Backyard Flocks, (2024) |
USDA |
2024 |
|
PMID 11546875
|
Science 293, 1840–1842, |
Hatta |
2001 |
|
PMID 8445709
|
J Virol 67, 1761–1764, |
Subbarao |
1993 |
|
-
|
CDC Reports A(H5N1) Ferret Study Results, (2024) |
CDC |
2024 |
|
PMID 17922570
|
Growth of H5N1 influenza A viruses in the upper respiratory tracts of mice |
Hatta M et al |
2007 |
|
PMID 37812908
|
Characterization of highly pathogenic clade 2.3.4.4b H5N1 mink influenza viruses. EBioMedicine 97, 104827, |
Maemura T et al |
2023 |
|
PMID 22722205
In OmniVira
|
Experimental adaptation of an influenza H5 HA confers respiratory droplet transmission to a reassortant H5 HA/H1N1 virus in ferrets. |
Imai |
2012 |
|
PMID 37816720
|
Creating resistance to avian influenza infection through genome editing of the ANP32 gene family |
Idoko-Akoh A et al |
2023 |
|
PMID 39737954
In OmniVira
|
A single mutation in dairy cow-associated H5N1 viruses increases receptor binding breadth. |
Good |
2024 |
|
-
|
Receptor binding specificity of a bovine A(H5N1) influenza virus. Preprint at 10.1101/2024.07.30.605893 (2024) |
Chopra P et al |
2024 |
|
-
|
Bovine H5N1 influenza virus binds poorly to human-type sialic acid receptors. Preprint at 10.1101/2024.08.01.606177 (2024) |
Santos JJS et al |
2024 |
|
PMID 37770028
|
Antiviral Susceptibility of Highly Pathogenic Avian Influenza A(H5N1) Viruses Circulating Globally in 2022–2023 |
Andreev K et al |
2024 |
|
PMID 40273240
In OmniVira
|
Emergence and interstate spread of highly pathogenic avian influenza A(H5N1) in dairy cattle in the United States. |
Nguyen |
2025 |
|
PMID 29056430
In OmniVira
|
A Highly Pathogenic Avian H7N9 Influenza Virus Isolated from A Human Is Lethal in Some Ferrets Infected via Respiratory Droplets. |
Imai |
2017 |
|
PMID 38916793
|
Emerg Infect Dis 30, 1484–1487, |
Belser |
2024 |
|
PMID 38494746
In OmniVira
|
Highly pathogenic avian influenza A(H5N1) virus of clade 2.3.4.4b isolated from a human case in Chile causes fatal disease and transmits between co-housed ferrets. |
Pulit-Penaloza |
2024 |
|
PMID 38750016
In OmniVira
|
Risk assessment of a highly pathogenic H5N1 influenza virus from mink. |
Restori |
2024 |
|
PMID 28597818
|
Enhanced pathogenicity and neurotropism of mouse-adapted H10N7 influenza virus are mediated by novel PB2 and NA mutations |
Zhang X et al |
2017 |
|
PMID 26738596
In OmniVira
|
Species difference in ANP32A underlies influenza A virus polymerase host restriction. |
Long |
2016 |
|
PMID 38750014
|
Structures of H5N1 influenza polymerase with ANP32B reveal mechanisms of genome replication and host adaptation |
Staller E et al |
2024 |
|
-
|
Preliminary report on genomic epidemiology of the 2024 H5N1 influenza A virus outbreak in U.S. cattle (Part 1 of 2), (2024) |
Worobey M et al |
2024 |
|
-
|
Preliminary report on genomic epidemiology of the 2024 H5N1 influenza A virus outbreak in U.S. cattle (Part 2 of 2), (2024) |
Worobey M et al |
2024 |
|
-
|
Outcome of H5N1 clade 2.3.4.4b virus infection in calves and lactating cows. Preprint at 10.1101/2024.08.09.607272 (2024) |
Halwe NJ et al |
2024 |
|
PMID 11333924
|
J Virol 75, 5398–5404, |
Massin |
2001 |
|
PMID 12490387
|
Virology 303, 240–252, |
Crescenzo-Chaigne |
2002 |
|
-
|
CDC A(H5N1) Bird Flu Response Update August 9, 2024, (2024) |
CDC |
2024 |
|
PMID 37638093
In OmniVira
|
Pilot of asymptomatic swabbing of humans following exposures to confirmed avian influenza A(H5) in avian species in England, 2021/2022. |
Capelastegui |
2023 |
|
PMID 23386633
|
Assessment of serosurveys for H5N1. Clin Infect Dis 56, 1206–1212, |
Toner ES et al |
2013 |
|
PMID 22928049
|
Seroprevalence of antibodies to avian influenza A (H5) and A (H9) viruses among market poultry workers, Hanoi, Vietnam, 2001 |
Uyeki TM et al |
2012 |
|
-
|
CDC A(H5N1) Bird Flu Response Update June 28, 2024, (2024) |
CDC |
2024 |
|
PMID 29477464
|
Lancet Infect Dis 18, E220–E227, |
Belser |
2018 |
|
PMID 23471620
|
Microbiol Mol Biol R 77, 144–156, |
Belser |
2013 |
|
PMID 22723413
In OmniVira
|
Airborne transmission of influenza A/H5N1 virus between ferrets. |
Herfst |
2012 |
|
PMID 17272724
|
A two-amino acid change in the hemagglutinin of the 1918 influenza virus abolishes transmission |
Tumpey TM et al. A two-amino acid change |
2007 |
|
PMID 30476172
|
Combination treatment with the cap-dependent endonuclease inhibitor baloxavir marboxil and a neuraminidase inhibitor in a mouse model of influenza A virus infection |
Fukao K et al |
2019 |
|
PMID 25435054
|
Dose regimen of favipiravir for Ebola virus disease |
Mentre F et al |
2015 |
|
PMID 7840556
|
Antimicrob Agents Chemother 38, 2270–2275, |
Ryan |
1994 |
|
PMID 24133191
|
The neuraminidase inhibitor oseltamivir is effective against A/Anhui/1/2013 (H7N9) influenza virus in a mouse model of acute respiratory distress syndrome |
Baranovich T et al |
2014 |
|
PMID 17194832
|
Efficacy of orally administered T-705 on lethal avian influenza A (H5N1) virus infections in mice. Antimicrob Agents Chemother 51, 845–851, |
Sidwell RW et al |
2007 |
|
PMID 30837531
|
Inhibition of avian-origin influenza A(H7N9) virus by the novel cap-dependent endonuclease inhibitor baloxavir marboxil. Sci Rep 9, 3466, |
Taniguchi K et al |
2019 |
|
PMID 10430945
|
Generation of influenza A viruses entirely from cloned cDNAs |
Neumann G et al |
1999 |
|
PMID 25321410
|
Nat Protoc 9, 2663–2681, |
Eisfeld |
2014 |
|
PMID 27595578
|
Viral deep sequencing needs an adaptive approach: IRMA, the iterative refinement meta-assembler. BMC Genomics 17, 708, |
Shepard SS et al |
2016 |
|
-
|
Available at |
Pattinson D IRI-UW-Bioinformatics/flu-ng |
2024 |
|
PMID 30621750
|
An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar. Genome Biol 20, 8, |
Grubaugh ND et al |
2019 |
|
PMID 24695404
|
Bioinformatics 30, 2114–2120, |
Bolger |
2014 |
|
-
|
Preprint at 10 |
Li H Aligning sequence reads |
2013 |
|
PMID 19505943
|
The Sequence Alignment/Map format and SAMtools |
Li H et al |
2009 |
|
PMID 18045936
|
Establishment of canine RNA polymerase I-driven reverse genetics for influenza A virus: its application for H5N1 vaccine production |
Murakami S et al |
2008 |
|
PMID 17050598
|
Contributions of two nuclear localization signals of influenza A virus nucleoprotein to viral replication |
Ozawa M et al |
2007 |
|
PMID 23061103
|
Meetings of the WHO working group on surveillance of influenza antiviral susceptibility — Geneva, November 2011 and June 2012, (2011) |
WHO |
2011 |