Glycan microarray analysis of the hemagglutinins from modern and pandemic influenza viruses reveals different receptor specificities.

James Stevens1 Ola Blixt Laurel Glaser Jeffery K Taubenberger Peter Palese James C Paulson Ian A Wilson
Affiliations 1 institutions
  1. Department of Molecular Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.

Abstract

Influenza A virus specificity for the host is mediated by the viral surface glycoprotein hemagglutinin (HA), which binds to receptors containing glycans with terminal sialic acids. Avian viruses preferentially bind to alpha2-3-linked sialic acids on receptors of intestinal epithelial cells, whereas human viruses are specific for the alpha2-6 linkage on epithelial cells of the lungs and upper respiratory tract. To define the receptor preferences of a number of human and avian H1 and H3 viruses, including the 1918 H1N1 pandemic strains, their hemagglutinins were analyzed using a recently described glycan array. The array, which contains 200 carbohydrates and glycoproteins, not only revealed clear differentiation of receptor preferences for alpha2-3 and/or alpha2-6 sialic acid linkage, but could also detect fine differences in HA specificity, such as preferences for fucosylation, sulfation and sialylation at positions 2 (Gal) and 3 (GlcNAc, GalNAc) of the terminal trisaccharide. For the two 1918 HA variants, the South Carolina (SC) HA (with Asp190, Asp225) bound exclusively alpha2-6 receptors, while the New York (NY) variant, which differed only by one residue (Gly225), had mixed alpha2-6/alpha2-3 specificity, especially for sulfated oligosaccharides. Only one mutation of the NY variant (Asp190Glu) was sufficient to revert the HA receptor preference to that of classical avian strains. Thus, the species barrier, as defined by the receptor specificity preferences of 1918 human viruses compared to likely avian virus progenitors, can be circumvented by changes at only two positions in the HA receptor binding site. The glycan array thus provides highly detailed profiles of influenza receptor specificity that can be used to map the evolution of new human pathogenic strains, such as the H5N1 avian influenza.

Supporting text Virus Host Location
Amino Acid Sequence 128 Animals 1948 Carbohydrate Conformation 4 Carbohydrate Sequence 5 Hemagglutinin Glycoproteins, Influenza Virus 180 Humans 1440 Influenza A virus 186 Microarray Analysis 3 Models, Molecular 99 Molecular Sequence Data 160 Receptors, Virus 204 Sequence Alignment 51 Sialic Acids 29

Evidence records

3 total
Functional Mechanism
3 records · 2 evidence types
Evidence type
2 records
OVE276
Key finding

Avian influenza A viruses bind α2-3-linked sialic acid receptors, whereas human influenza A viruses bind α2-6-linked receptors, defining host-specific receptor usage.

Virus
Host
Location
Not specified
Supporting text

Influenza A virus specificity for the host is mediated by the viral surface glycoprotein hemagglutinin (HA), which binds to receptors containing glycans with terminal sialic acids. Avian viruses preferentially bind to alpha2-3-linked sialic acids on receptors of intestinal epithelial cells, whereas human viruses are specific for the alpha2-6 linkage on epithelial cells of the lungs and upper respiratory tract.

Method
receptor-binding assay | sialic acid linkage characterization
Receptors
alpha2-3-linked sialic acid | alpha2-6 linkage
OVE277
Key finding

Glycan microarray analysis of human and avian H1 and H3 influenza A hemagglutinins revealed distinct receptor preferences for α2-3 and α2-6 sialic acid linkages and fine specificity differences including fucosylation, sulfation, and sialylation.

Virus
Host
Location
Not specified
Supporting text

To define the receptor preferences of a number of human and avian H1 and H3 viruses, including the 1918 H1N1 pandemic strains, their hemagglutinins were analyzed using a recently described glycan array. The array, which contains 200 carbohydrates and glycoproteins, not only revealed clear differentiation of receptor preferences for alpha2-3 and/or alpha2-6 sialic acid linkage, but could also detect fine differences in HA specificity, such as preferences for fucosylation, sulfation and sialylation at positions 2 (Gal) and 3 (GlcNAc, GalNAc) of the terminal trisaccharide.

Method
glycan microarray
Receptors
alpha2-3 sialic acid | alpha2-6 sialic acid | fucosylation | sulfation | sialylation
Evidence type
1 records
OVE279
Key finding

A single Asp190Glu substitution in the 1918 New York HA variant restores avian-type receptor binding, demonstrating that a single mutation can revert host specificity.

Virus
Host
Not specified
Location
Not specified
Supporting text

Only one mutation of the NY variant (Asp190Glu) was sufficient to revert the HA receptor preference to that of classical avian strains.

Genes or proteins
hemagglutinin (HA)
Receptors
alpha2-3 sialic acid receptor
Mutations
Asp190Glu
Mechanism types
receptor binding | host-range expansion