Natural SARS-CoV-2 Infection in a Free-Ranging Black-Tailed Marmoset (Mico melanurus) from an Urban Area in Mid-West Brazil.

Asheley Hb Pereira1 Anna L Vasconcelos2 Victoria Lb Silva3 Beatriz S Nogueira4 Anna Cp Silva4 Richard C Pacheco3 Marcos A Souza5 Edson M Colodel5 Daniel G Ubiali1 Alexander W Biondo6 Luciano Nakazato4 Valéria Dutra7
Affiliations 7 institutions
  1. Setor de Anatomia Patológica, Universidade Federal Rural do Rio de Janeiro, Rio de Janeiro, Brazil.
  2. Biotério Central, Universidade Federal do Mato Grosso, Cuiabá, Mato Grosso, Brazil.
  3. Laboratório de Parasitologia Veterinária e Doenças Parasitárias dos Animais Domésticos e Silvestres, Universidade Federal do Mato Grosso, Cuiabá, Mato Grosso, Brazil.
  4. Laboratório de Microbiologia e Biologia Molecular Veterinária, Universidade Federal do Mato Grosso, Cuiabá, Mato Grosso, Brazil.
  5. Laboratório de Patologia Veterinária, Universidade Federal do Mato Grosso, Cuiabá, Mato Grosso, Brazil.
  6. Departamento de Medicina Veterinária, Universidade Federal do Paraná, Curitiba, Paraná, Brazil.
  7. Laboratório de Microbiologia e Biologia Molecular Veterinária, Universidade Federal do Mato Grosso, Cuiabá, Mato Grosso, Brazil. Electronic address: [email protected].

Abstract

The emergence of spillover pathogens such as SARS-CoV-2 is a risk to vulnerable human populations. We report natural SARS-CoV-2 infection in a free-ranging adult female black-tailed marmoset (Mico melanurus) from an urban area of Cuiabá, Mato Grosso State, Brazil. The animal was found after a motor vehicle collision without previous clinical history. Necropsy confirmed polytrauma. Severe multifocal to coalescent haemorrhage and mild multifocal peribronchial lymphocytic hyperplasia were seen in lung sections. The alveolar septa were multifocally expanded by a few lymphocytes. Mild lymphocytic periportal hepatitis and interstitial nephritis were found. The lymphoid nodules of the large intestine showed marked lymphocytic hyperplasia. Infection by SARS-CoV-2 was established by viral RNA detection in a pool of nasopharyngeal and oropharyngeal swabs and liver samples. Immunohistochemistry detected the viral nucleocapsid protein in sections of lung, liver, spleen, lymph nodes and large intestine, and spike protein antigen in lung tissue. This is the first report of naturally occurring SARS-CoV-2 infection in a New World monkey. Platyrrhine species should be included as potential hosts of natural infection of SARS-CoV-2.

Supporting text Virus Host Location
COVID-19 467 New World monkey 1 One Health 98 platyrrhines 1 SARS-CoV-2 550 COVID-19 425 Animals 1949 Brazil 50 Callithrix 6 Callitrichinae 1 Female 289 Hyperplasia 1 SARS-CoV-2 453 Mico melanurus 1

Evidence records

3 total
Zoonotic Surveillance
3 records · 1 evidence types
Evidence type
3 records
OVE5938
Key finding

A free-ranging black-tailed marmoset (Mico melanurus) in an urban area of Cuiabá, Brazil was naturally infected with SARS-CoV-2, indicating a human-to-animal spillback event.

Virus
Host
Location
Supporting text

We report natural SARS-CoV-2 infection in a free-ranging adult female black-tailed marmoset (Mico melanurus) from an urban area of Cuiabá, Mato Grosso State, Brazil.

Method
viral RNA detection | immunohistochemistry
Geographic raw
Cuiabá, Mato Grosso State, Brazil
OVE5935
Key finding

SARS-CoV-2 RNA was detected in nasopharyngeal, oropharyngeal, and liver samples from a free-ranging black-tailed marmoset found in Cuiabá, Mato Grosso State, Brazil.

Virus
Host
Location
Supporting text

We report natural SARS-CoV-2 infection in a free-ranging adult female black-tailed marmoset (Mico melanurus) from an urban area of Cuiabá, Mato Grosso State, Brazil. Infection by SARS-CoV-2 was established by viral RNA detection in a pool of nasopharyngeal and oropharyngeal swabs and liver samples.

Method
viral RNA detection
Sample type
nasopharyngeal swabs | oropharyngeal swabs | liver samples
Geographic raw
Cuiabá, Mato Grosso State, Brazil
Country inferred
BRA
OVE5936
Key finding

SARS-CoV-2 nucleocapsid and spike proteins were detected by immunohistochemistry in multiple tissues of a free-ranging black-tailed marmoset from Cuiabá, Mato Grosso State, Brazil.

Virus
Host
Location
Supporting text

We report natural SARS-CoV-2 infection in a free-ranging adult female black-tailed marmoset (Mico melanurus) from an urban area of Cuiabá, Mato Grosso State, Brazil. Immunohistochemistry detected the viral nucleocapsid protein in sections of lung, liver, spleen, lymph nodes and large intestine, and spike protein antigen in lung tissue.

Method
immunohistochemistry
Sample type
lung tissue | liver | spleen | lymph nodes | large intestine
Geographic raw
Cuiabá, Mato Grosso State, Brazil
Country inferred
BRA