An ACE2-dependent Sarbecovirus in Russian bats is resistant to SARS-CoV-2 vaccines.

Stephanie N Seifert1 Shuangyi Bai1 Stephen Fawcett1 Elizabeth B Norton2 Kevin J Zwezdaryk2 James Robinson3 Bronwyn Gunn1 Michael Letko1
Affiliations 3 institutions
  1. Paul G. Allen School for Global Health, Washington State University, Pullman, Washington, United States of America.
  2. Department of Microbiology and Immunology, Tulane University School of Medicine, New Orleans, Louisiana, United States of America.
  3. Department of Pediatrics, Tulane University School of Medicine, New Orleans, Louisiana, United States of America.

Abstract

Spillover of sarbecoviruses from animals to humans has resulted in outbreaks of severe acute respiratory syndrome SARS-CoVs and the ongoing COVID-19 pandemic. Efforts to identify the origins of SARS-CoV-1 and -2 has resulted in the discovery of numerous animal sarbecoviruses-the majority of which are only distantly related to known human pathogens and do not infect human cells. The receptor binding domain (RBD) on sarbecoviruses engages receptor molecules on the host cell and mediates cell invasion. Here, we tested the receptor tropism and serological cross reactivity for RBDs from two sarbecoviruses found in Russian horseshoe bats. While these two viruses are in a viral lineage distinct from SARS-CoV-1 and -2, the RBD from one virus, Khosta 2, was capable of using human ACE2 to facilitate cell entry. Viral pseudotypes with a recombinant, SARS-CoV-2 spike encoding for the Khosta 2 RBD were resistant to both SARS-CoV-2 monoclonal antibodies and serum from individuals vaccinated for SARS-CoV-2. Our findings further demonstrate that sarbecoviruses circulating in wildlife outside of Asia also pose a threat to global health and ongoing vaccine campaigns against SARS-CoV-2.

Supporting text Virus Host Location
Chiroptera 371 COVID-19 425 Angiotensin-Converting Enzyme 2 177 Animals 1948 Antibodies, Monoclonal 26 Antibodies, Viral 212 COVID-19 Vaccines 11 Humans 1440 Pandemics 108 SARS-CoV-2 453 Spike Glycoprotein, Coronavirus 274 ACE2 protein, human 87 spike protein, SARS-CoV-2 157

Evidence records

3 total
Zoonotic Surveillance
2 records · 2 evidence types
Evidence type
1 records
OVE6376
Key finding

Two sarbecoviruses were detected in Russian horseshoe bats.

Virus
Host
Location
Supporting text

Here, we tested the receptor tropism and serological cross reactivity for RBDs from two sarbecoviruses found in Russian horseshoe bats.

Method
viral detection | RBD characterization
Geographic raw
Russia
Country inferred
RUS
Evidence type
1 records
OVE6379
Key finding

Sarbecoviruses are circulating in wildlife populations outside of Asia, indicating ecological maintenance of these viruses in wild hosts.

Virus
Host
Not specified
Location
Supporting text

Our findings further demonstrate that sarbecoviruses circulating in wildlife outside of Asia also pose a threat to global health and ongoing vaccine campaigns against SARS-CoV-2.

Method
ecological inference from viral surveillance
Geographic raw
outside of Asia
Functional Mechanism
1 records · 1 evidence types
Evidence type
1 records
OVE6377
Key finding

The RBD from Khosta 2 enabled viral entry by using human ACE2 as a receptor.

Virus
Host
Location
Not specified
Supporting text

The RBD from one virus, Khosta 2, was capable of using human ACE2 to facilitate cell entry.

Method
receptor tropism assay | cell entry assay | pseudovirus entry test
Receptors
human ACE2