Genetic, Molecular, and Pathogenic Characterization of the H9N2 Avian Influenza Viruses Currently Circulating in South China.

Hailiang Sun1 Jiate Lin1 Zhiting Liu1 Yanan Yu1 Meihua Wu1 Shuo Li1 Yang Liu1 Yaling Feng1 Yuqian Wu1 Mingliang Li1 Peirong Jiao1 Kaijian Luo1 Ming Liao1
Affiliations 1 institutions
  1. College of Veterinary Medicine, South China Agricultural University, Guangzhou 510642, China.

Abstract

The prevalence and variation of the H9N2 avian influenza virus (AIV) pose a threat to public health. A total of eight viruses isolated from farmed poultry in South China during 2017-2018 were selected as representative strains for further systematic study. Phylogenetic analyses indicated that these prevalent viruses belong to the Y280-like lineage and that the internal genes are highly similar to those of recently circulating human H7N9 viruses. The receptor-binding assay showed that most of the H9N2 isolates preferentially bound to the human-like receptor, increasing the risk of them crossing the species barrier and causing human infection. Our in vitro, multi-step growth curve results indicate these viruses can effectively replicate in mammalian cells. Infection in mice showed that three viruses effectively replicated in the lung of mice. Infection in swine revealed that the viruses readily replicated in the upper respiratory tract of pig and effectively induced viral shedding. Our findings suggested that the H9N2 AIVs circulating in poultry recently acquired an enhanced ability to transmit from avian to mammalians, including humans. Based on our findings, we propose that it is essential to strengthen the efforts to surveil and test the pathogenicity of H9N2 AIVs.

Supporting text Virus Host Location
H9N2 27 influenza A virus 227 pathogenicity 54 pigs 12 receptor 19 replication 9 Influenza A Virus, H9N2 Subtype 71 Animals 1949 Birds 212 China 229 Genes, Viral 37 Humans 1441 Influenza A Virus, H7N9 Subtype 87 Influenza in Birds 341 Influenza, Human 286 Mice 253 Orthomyxoviridae Infections 228 Phylogeny 805 Poultry 112 Receptors, Virus 205 Swine 258 Virus Replication 191

Evidence records

5 total
Zoonotic Surveillance
1 records · 1 evidence types
Evidence type
1 records
OVE3497
Key finding

Eight H9N2 avian influenza viruses were successfully isolated from farmed poultry in South China during 2017–2018.

Virus
Host
Location
Not specified
Supporting text

A total of eight viruses isolated from farmed poultry in South China during 2017-2018 were selected as representative strains for further systematic study.

Sample type
poultry samples
Experimental Infection
2 records · 1 evidence types
Evidence type
2 records
OVE3501
Key finding

H9N2 avian influenza viruses replicated in the upper respiratory tract of pigs and induced viral shedding in controlled infection experiments.

Virus
Host
Location
Not specified
Supporting text

Infection in swine revealed that the viruses readily replicated in the upper respiratory tract of pig and effectively induced viral shedding.

Method
swine infection challenge | viral replication assay | shedding detection
Sample type
upper respiratory tract samples
Experimental system
animal challenge model (swine infection)
OVE3503
Key finding

H9N2 avian influenza viruses circulating in poultry have newly acquired enhanced ability to transmit from avian to mammalian hosts.

Virus
Host
Location
Supporting text

A total of eight viruses isolated from farmed poultry in South China during 2017-2018 were selected as representative strains for further systematic study. Our findings suggested that the H9N2 AIVs circulating in poultry recently acquired an enhanced ability to transmit from avian to mammalians, including humans.

Method
mouse infection | swine infection | receptor-binding assay | phylogenetic analysis
Experimental system
experimental infection and comparative characterization study
Functional Mechanism
1 records · 1 evidence types
Evidence type
1 records
OVE3499
Key finding

H9N2 avian influenza virus isolates from South China preferentially bound to human-like receptors, indicating receptor compatibility with human-type sialic acids and potential for cross-species infection.

Virus
Host
Location
Not specified
Supporting text

The receptor-binding assay showed that most of the H9N2 isolates preferentially bound to the human-like receptor, increasing the risk of them crossing the species barrier and causing human infection.

Method
receptor-binding assay
Receptors
human-like receptor
Genomic Evolution
1 records · 1 evidence types
Evidence type
1 records
OVE3498
Key finding

Phylogenetic analysis showed that H9N2 avian influenza viruses circulating in South China belong to the Y280-like lineage and have internal genes closely related to human H7N9 viruses.

Virus
Host
Location
Not specified
Supporting text

Phylogenetic analyses indicated that these prevalent viruses belong to the Y280-like lineage and that the internal genes are highly similar to those of recently circulating human H7N9 viruses.

Genes or proteins
internal genes
Analysis methods
phylogenetic analysis