The haemagglutinin gene of bovine-origin H5N1 influenza viruses currently retains receptor-binding and pH-fusion characteristics of avian host phenotype.

Jiayun Yang1 Mehnaz Qureshi1 Reddy Kolli1 Thomas P Peacock1,2 Jean-Remy Sadeyen1 Toby Carter1 Samuel Richardson1 Rebecca Daines1 Wendy S Barclay2 Ian H Brown1 Munir Iqbal1
Affiliations 2 institutions
  1. The Pirbright Institute, Pirbright, UK.
  2. Department of Infectious Disease, Imperial College London, London, UK.

Abstract

Clade 2.3.4.4b H5N1 high pathogenicity avian influenza virus (HPAIV) has caused a panzootic affecting all continents except Australia, expanding its host range to several mammalian species. In March 2024, H5N1 HPAIV was first detected in dairy cattle and goats in the United States. Over 891 dairy farms across 16 states have tested positive until 25 December 2024, with zoonotic infections reported among dairy workers. This raises concerns about the virus undergoing evolutionary changes in cattle that could enhance its zoonotic potential. The Influenza glycoprotein haemagglutinin (HA) facilitates entry into host cells through receptor binding and pH-induced fusion with cellular membranes. Adaptive changes in HA modulate virus-host cell interactions. This study compared the HA genes of cattle and goat H5N1 viruses with the dominant avian-origin clade 2.3.4.4b H5N1 in the United Kingdom, focusing on receptor binding, pH fusion, and thermostability. All the tested H5N1 viruses showed binding exclusively to avian-like receptors, with a pH fusion of 5.9, outside the pH range associated with efficient human airborne transmissibility (pH 5.0-5.5). We further investigated the impact of emerging HA substitutions seen in the ongoing cattle outbreaks, but saw little phenotypic difference, with continued exclusive binding to avian-like receptor analogues and pHs of fusion above 5.8. This suggests that the HA genes from the cattle and goat outbreaks do not pose an enhanced threat compared to circulating avian viruses. However, given the rapid evolution of H5 viruses, continuous monitoring and updated risk assessments remain essential to understanding virus zoonotic and pandemic risks.

Supporting text Virus Host Location
cattle and goat H5N1 1 High pathogenicity avian influenza 3 pH fusion 1 receptor binding 30 zoonotic risk 9 Hemagglutinin Glycoproteins, Influenza Virus 180 Influenza A Virus, H5N1 Subtype 300 Orthomyxoviridae Infections 228 Animals 1948 Birds 212 Cattle 126 Goats 24 Humans 1440 Hydrogen-Ion Concentration 12 Influenza in Birds 341 Influenza, Human 286 Phenotype 12 Phylogeny 805 Receptors, Virus 204 United Kingdom 8

Evidence records

3 total
Zoonotic Surveillance
1 records · 1 evidence types
Evidence type
1 records
OVE8777
Key finding

H5N1 high pathogenicity avian influenza virus was detected in dairy cattle and goats in the United States in March 2024.

Virus
Host
Location
Supporting text

In March 2024, H5N1 HPAIV was first detected in dairy cattle and goats in the United States.

Method
viral RNA or antigen detection (unspecified surveillance test)
Geographic raw
United States
Country inferred
USA
Functional Mechanism
2 records · 1 evidence types
Evidence type
2 records
OVE8779
Key finding

H5N1 influenza viruses from cattle and goats bound exclusively to avian-like receptors, indicating retention of avian-type receptor preference.

Virus
Host
Location
Not specified
Supporting text

This study compared the HA genes of cattle and goat H5N1 viruses with the dominant avian-origin clade 2.3.4.4b H5N1 in the United Kingdom, focusing on receptor binding, pH fusion, and thermostability. All the tested H5N1 viruses showed binding exclusively to avian-like receptors, with a pH fusion of 5.9, outside the pH range associated with efficient human airborne transmissibility (pH 5.0-5.5).

Method
receptor-binding assay | glycoprotein haemagglutinin analysis
Receptors
avian-like receptors
OVE8778
Key finding

Zoonotic infections with H5N1 HPAIV were reported among dairy workers associated with infected cattle farms in the United States, indicating animal-to-human spillover from dairy cattle.

Virus
Host
Location
Supporting text

In March 2024, H5N1 HPAIV was first detected in dairy cattle and goats in the United States. Over 891 dairy farms across 16 states have tested positive until 25 December 2024, with zoonotic infections reported among dairy workers.

Method
viral testing of cattle farms | investigation of zoonotic human infections
Receptors
avian-like receptors | avian-like receptor