The potential of H5N1 viruses to adapt to bovine cells varies throughout evolution.

Matthew L Turnbull1 Mohammad Khalid Zakaria1 Nicole S Upfold1 Siddharth Bakshi1 Callum Magill1 Udeet Ranjan Das1 Andrew T Clarke1,2 Laura Mojsiejczuk1 Vanessa Herder1,2 Kieran Dee1 Nancy Liu1 Monika Folwarczna1 Georgios Ilia1 Wilhelm Furnon1,2 Verena Schultz1 Hanting Chen1 Ryan Devlin3 Jack McCowan3 Alex L Young3 Wai-Wai Po1 Katherine Smollett1 Muhammad Ahsan Yaseen4,5 Rebecca Ross1 Avanti Bhide1 Bianca van Kekem2 Ron A M Fouchier2 Ana da Silva Filipe1 Munir Iqbal6 Ed Roberts3 Joseph Hughes1 Dirk Werling7 Pablo R Murcia8 Massimo Palmarini9,10
Affiliations 10 institutions
  1. MRC-University of Glasgow Centre for Virus Research, Glasgow, UK.
  2. Department of Viroscience, Erasmus Medical Centre, Rotterdam, The Netherlands.
  3. CRUK Scotland Institute, Glasgow, UK.
  4. Faculty of Veterinary Medicine, University of Teramo, Loc. Piano D'Accio, Teramo, Italy.
  5. Istituto Zooprofilattico Sperimentale dell' Abruzzo e Molise "G. Caporale", Teramo, Italy.
  6. The Pirbright Institute, Woking, UK.
  7. Department for Pathobiology and Population Sciences, Centre for Vaccinology and Regenerative Medicine, Royal Veterinary College, London, UK.
  8. MRC-University of Glasgow Centre for Virus Research, Glasgow, UK. [email protected].
  9. MRC-University of Glasgow Centre for Virus Research, Glasgow, UK. [email protected].
  10. Department of Viroscience, Erasmus Medical Centre, Rotterdam, The Netherlands. [email protected].

Abstract

Avian influenza H5N1 clade 2.3.4.4b viruses caused a global panzootic and, unexpectedly, widespread outbreaks in dairy cattle, therefore representing a pandemic threat. To inform control strategies, it is critical to determine whether the potential to adapt to bovine cells is a general feature of H5N1 viruses, is specific to viruses of clade 2.3.4.4b, or narrowly restricted to some genotypes within this clade. Using a large panel of recombinant viruses representing >60 years of H5N1 history and other IAVs for comparison, we demonstrate replicative fitness in bovine cells is: (i) highly variable across 2.3.4.4b genotypes, (ii) limited in viruses predating the global expansion of this clade, (iii) determined by the internal gene cassette, and (iv) not restricted to udder epithelial cells. Mutations in the PB2 polymerase subunit emerge as key determinants of adaptation, although their phenotypic effects are context dependent. Bovine B3.13 and some avian genotypes exhibit enhanced modulation of bovine interferon-induced antiviral responses, determined by at least PB2, nucleoprotein, and the non-structural protein NS1. Our results highlight the polygenic nature of IAV host range, and reveal that the replication fitness in bovine cells, and likely their potential to adapt to cattle, varies greatly during the evolutionary trajectory of H5N1 viruses.

Supporting text Virus Host Location
Adaptation, Physiological 33 Influenza A Virus, H5N1 Subtype 300 Orthomyxoviridae Infections 228 Animals 1948 Cattle 126 Cell Line 158 Evolution, Molecular 176 Genotype 137 Madin Darby Canine Kidney Cells 36 Mutation 209 Viral Nonstructural Proteins 28 Viral Proteins 152 Virus Replication 191

Evidence records

1 total
Experimental Infection
1 records · 1 evidence types
Evidence type
1 records
OVE10263
Key finding

Recombinant H5N1 influenza viruses exhibit variable replication fitness in bovine cells across clades and genotypes, indicating differential host compatibility with cattle-derived systems.

Virus
Host
Location
Not specified
Supporting text

Using a large panel of recombinant viruses representing >60 years of H5N1 history and other IAVs for comparison, we demonstrate replicative fitness in bovine cells is: (i) highly variable across 2.3.4.4b genotypes, (ii) limited in viruses predating the global expansion of this clade, (iii) determined by the internal gene cassette, and (iv) not restricted to udder epithelial cells.

Method
recombinant virus generation | cell infection assay | replication fitness measurement
Sample type
cell culture | epithelial cell layer
Experimental system
in vitro bovine cell culture system using recombinant influenza viruses